Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
RORAP35398 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.94□□□□□ -1.62
RORAP35398 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
RORAP35398 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RORAP35398 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RORAP35398 AC112198.2-201ENST00000426589 6996 ntBASIC4.94□□□□□ -1.62
RORAP35398 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
RORAP35398 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
RORAP35398 AC107021.2-201ENST00000567714 2095 ntBASIC4.93□□□□□ -1.62
RORAP35398 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RORAP35398 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RORAP35398 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RORAP35398 BTBD10P1-201ENST00000549824 1352 ntBASIC4.93□□□□□ -1.62
RORAP35398 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.93□□□□□ -1.62
RORAP35398 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
RORAP35398 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RORAP35398 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
RORAP35398 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RORAP35398 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.93□□□□□ -1.62
RORAP35398 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RORAP35398 AC103591.2-201ENST00000265259 766 ntBASIC4.93□□□□□ -1.62
RORAP35398 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
RORAP35398 RN7SKP104-201ENST00000362605 328 ntBASIC4.93□□□□□ -1.62
RORAP35398 RNA5SP90-201ENST00000364801 99 ntBASIC4.93□□□□□ -1.62
RORAP35398 SNORA48.4-201ENST00000391089 134 ntBASIC4.93□□□□□ -1.62
RORAP35398 AL078599.1-201ENST00000402075 293 ntBASIC4.93□□□□□ -1.62
RORAP35398 SEPT7P8-201ENST00000413308 775 ntBASIC4.93□□□□□ -1.62
RORAP35398 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.93□□□□□ -1.62
RORAP35398 DDX39BP1-205ENST00000422507 192 ntBASIC4.93□□□□□ -1.62
RORAP35398 RPL19P16-201ENST00000433839 588 ntBASIC4.93□□□□□ -1.62
RORAP35398 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.93□□□□□ -1.62
RORAP35398 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RORAP35398 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.93□□□□□ -1.62
RORAP35398 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.93□□□□□ -1.62
RORAP35398 RN7SL346P-201ENST00000491561 294 ntBASIC4.93□□□□□ -1.62
RORAP35398 RPS23P1-201ENST00000491662 432 ntBASIC4.93□□□□□ -1.62
RORAP35398 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RORAP35398 CUL4AP1-201ENST00000514750 1863 ntBASIC4.93□□□□□ -1.62
RORAP35398 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.93□□□□□ -1.62
RORAP35398 OR5AZ1P-201ENST00000527448 943 ntBASIC4.93□□□□□ -1.62
RORAP35398 AL713998.2-201ENST00000604538 1198 ntBASIC4.93□□□□□ -1.62
RORAP35398 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.93□□□□□ -1.62
RORAP35398 AC093799.2-201ENST00000610062 578 ntBASIC4.93□□□□□ -1.62
RORAP35398 RBPJP2-201ENST00000618187 1444 ntBASIC4.93□□□□□ -1.62
RORAP35398 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RORAP35398 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RORAP35398 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RORAP35398 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
RORAP35398 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RORAP35398 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.93□□□□□ -1.62
RORAP35398 THAP12P5-201ENST00000405864 2275 ntBASIC4.93□□□□□ -1.62
RORAP35398 AC025574.1-201ENST00000554784 1653 ntBASIC4.92□□□□□ -1.62
RORAP35398 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RORAP35398 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RORAP35398 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RORAP35398 AC021242.1-201ENST00000507315 2035 ntBASIC4.92□□□□□ -1.62
RORAP35398 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RORAP35398 SCARNA15-201ENST00000607520 4325 ntBASIC4.92□□□□□ -1.62
RORAP35398 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RORAP35398 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RORAP35398 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
RORAP35398 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RORAP35398 OR9G4-201ENST00000302957 984 ntBASIC4.92□□□□□ -1.62
RORAP35398 OR8V1P-201ENST00000395193 873 ntBASIC4.92□□□□□ -1.62
RORAP35398 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.92□□□□□ -1.62
RORAP35398 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.92□□□□□ -1.62
RORAP35398 OR13Z1P-201ENST00000416141 834 ntBASIC4.92□□□□□ -1.62
RORAP35398 AC013470.3-201ENST00000420252 1194 ntBASIC4.92□□□□□ -1.62
RORAP35398 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.92□□□□□ -1.62
RORAP35398 AL161722.2-201ENST00000434731 981 ntBASIC4.92□□□□□ -1.62
RORAP35398 PA2G4P6-201ENST00000438325 1197 ntBASIC4.92□□□□□ -1.62
RORAP35398 RPS29P10-201ENST00000439197 166 ntBASIC4.92□□□□□ -1.62
RORAP35398 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.92□□□□□ -1.62
RORAP35398 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.92□□□□□ -1.62
RORAP35398 KNOP1P3-201ENST00000446933 426 ntBASIC4.92□□□□□ -1.62
RORAP35398 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.92□□□□□ -1.62
RORAP35398 TPT1P1-201ENST00000458495 518 ntBASIC4.92□□□□□ -1.62
RORAP35398 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.92□□□□□ -1.62
RORAP35398 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.92□□□□□ -1.62
RORAP35398 AC093827.1-201ENST00000480094 861 ntBASIC4.92□□□□□ -1.62
RORAP35398 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.92□□□□□ -1.62
RORAP35398 RPS12P31-201ENST00000491419 398 ntBASIC4.92□□□□□ -1.62
RORAP35398 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.92□□□□□ -1.62
RORAP35398 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.92□□□□□ -1.62
RORAP35398 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.92□□□□□ -1.62
RORAP35398 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RORAP35398 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RORAP35398 SNORD39.2-201ENST00000579995 76 ntBASIC4.92□□□□□ -1.62
RORAP35398 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
RORAP35398 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
RORAP35398 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.92□□□□□ -1.62
RORAP35398 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.92□□□□□ -1.62
RORAP35398 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.92□□□□□ -1.62
RORAP35398 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.92□□□□□ -1.62
RORAP35398 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.92□□□□□ -1.62
RORAP35398 AL445528.2-201ENST00000620582 470 ntBASIC4.92□□□□□ -1.62
RORAP35398 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.92□□□□□ -1.62
RORAP35398 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
RORAP35398 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
RORAP35398 AC138627.1-204ENST00000641894 765 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms