Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC010872.1-201ENST00000624225 675 ntBASIC5.89□□□□□ -1.47
CIITAP33076 AC090506.2-201ENST00000624521 419 ntBASIC5.89□□□□□ -1.47
CIITAP33076 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.89□□□□□ -1.47
CIITAP33076 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CIITAP33076 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CIITAP33076 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CIITAP33076 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CIITAP33076 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CIITAP33076 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
CIITAP33076 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CIITAP33076 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CIITAP33076 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CIITAP33076 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CIITAP33076 AC020633.1-201ENST00000468439 2247 ntBASIC5.89□□□□□ -1.47
CIITAP33076 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.88□□□□□ -1.47
CIITAP33076 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CIITAP33076 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
CIITAP33076 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CIITAP33076 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CIITAP33076 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.88□□□□□ -1.47
CIITAP33076 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.88□□□□□ -1.47
CIITAP33076 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
CIITAP33076 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.88□□□□□ -1.47
CIITAP33076 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CIITAP33076 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CIITAP33076 RNU4-39P-201ENST00000362455 127 ntBASIC5.88□□□□□ -1.47
CIITAP33076 PTGES3P2-201ENST00000407942 482 ntBASIC5.88□□□□□ -1.47
CIITAP33076 RN7SKP126-201ENST00000411143 300 ntBASIC5.88□□□□□ -1.47
CIITAP33076 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.88□□□□□ -1.47
CIITAP33076 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.88□□□□□ -1.47
CIITAP33076 AC073508.1-201ENST00000428866 656 ntBASIC5.88□□□□□ -1.47
CIITAP33076 AC023141.6-201ENST00000429418 337 ntBASIC5.88□□□□□ -1.47
CIITAP33076 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.88□□□□□ -1.47
CIITAP33076 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.88□□□□□ -1.47
CIITAP33076 AC090018.1-201ENST00000434369 367 ntBASIC5.88□□□□□ -1.47
CIITAP33076 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.88□□□□□ -1.47
CIITAP33076 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.88□□□□□ -1.47
CIITAP33076 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.88□□□□□ -1.47
CIITAP33076 KNOP1P3-201ENST00000446933 426 ntBASIC5.88□□□□□ -1.47
CIITAP33076 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.88□□□□□ -1.47
CIITAP33076 AC108161.1-201ENST00000461060 402 ntBASIC5.88□□□□□ -1.47
CIITAP33076 AC097484.1-201ENST00000471148 389 ntBASIC5.88□□□□□ -1.47
CIITAP33076 AC092902.1-201ENST00000486999 259 ntBASIC5.88□□□□□ -1.47
CIITAP33076 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
CIITAP33076 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.88□□□□□ -1.47
CIITAP33076 MTATP6P9-201ENST00000515039 680 ntBASIC5.88□□□□□ -1.47
CIITAP33076 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.88□□□□□ -1.47
CIITAP33076 AP002373.2-201ENST00000541631 1060 ntBASIC5.88□□□□□ -1.47
CIITAP33076 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.88□□□□□ -1.47
CIITAP33076 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.88□□□□□ -1.47
CIITAP33076 AC016180.1-201ENST00000567945 403 ntBASIC5.88□□□□□ -1.47
CIITAP33076 AC007342.5-201ENST00000571340 2142 ntBASIC5.88□□□□□ -1.47
CIITAP33076 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.88□□□□□ -1.47
CIITAP33076 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.88□□□□□ -1.47
CIITAP33076 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.88□□□□□ -1.47
CIITAP33076 AC104763.3-201ENST00000613765 618 ntBASIC5.88□□□□□ -1.47
CIITAP33076 AC009269.6-201ENST00000621778 588 ntBASIC5.88□□□□□ -1.47
CIITAP33076 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.88□□□□□ -1.47
CIITAP33076 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.88□□□□□ -1.47
CIITAP33076 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CIITAP33076 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CIITAP33076 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CIITAP33076 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CIITAP33076 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
CIITAP33076 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.88□□□□□ -1.47
CIITAP33076 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.88□□□□□ -1.47
CIITAP33076 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CIITAP33076 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CIITAP33076 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CIITAP33076 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CIITAP33076 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.87□□□□□ -1.47
CIITAP33076 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CIITAP33076 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.87□□□□□ -1.47
CIITAP33076 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.87□□□□□ -1.47
CIITAP33076 AC211486.3-201ENST00000412694 621 ntBASIC5.87□□□□□ -1.47
CIITAP33076 RPL23AP27-201ENST00000415161 451 ntBASIC5.87□□□□□ -1.47
CIITAP33076 TRIM60P17-201ENST00000415181 719 ntBASIC5.87□□□□□ -1.47
CIITAP33076 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.87□□□□□ -1.47
CIITAP33076 MTND4P11-201ENST00000417020 1058 ntBASIC5.87□□□□□ -1.47
CIITAP33076 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.87□□□□□ -1.47
CIITAP33076 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.87□□□□□ -1.47
CIITAP33076 SFR1P2-201ENST00000421841 730 ntBASIC5.87□□□□□ -1.47
CIITAP33076 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.87□□□□□ -1.47
CIITAP33076 AL354766.1-201ENST00000423396 542 ntBASIC5.87□□□□□ -1.47
CIITAP33076 AC009238.2-201ENST00000431026 355 ntBASIC5.87□□□□□ -1.47
CIITAP33076 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC5.87□□□□□ -1.47
CIITAP33076 GAPDHP58-201ENST00000438477 1006 ntBASIC5.87□□□□□ -1.47
CIITAP33076 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.87□□□□□ -1.47
CIITAP33076 RN7SL515P-201ENST00000463999 297 ntBASIC5.87□□□□□ -1.47
CIITAP33076 RPS18P6-201ENST00000476880 458 ntBASIC5.87□□□□□ -1.47
CIITAP33076 AC090114.3-201ENST00000479267 829 ntBASIC5.87□□□□□ -1.47
CIITAP33076 AC097173.1-201ENST00000505862 819 ntBASIC5.87□□□□□ -1.47
CIITAP33076 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC5.87□□□□□ -1.47
CIITAP33076 AC016559.2-201ENST00000510759 359 ntBASIC5.87□□□□□ -1.47
CIITAP33076 AC098976.1-201ENST00000513014 541 ntBASIC5.87□□□□□ -1.47
CIITAP33076 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.87□□□□□ -1.47
CIITAP33076 OR7E10P-201ENST00000526420 991 ntBASIC5.87□□□□□ -1.47
CIITAP33076 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.87□□□□□ -1.47
CIITAP33076 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.87□□□□□ -1.47
CIITAP33076 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms