Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.08□□□□□ -1.44
POLR2AP24928 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
POLR2AP24928 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
POLR2AP24928 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
POLR2AP24928 RNU6-1000P-201ENST00000391066 106 ntBASIC6.08□□□□□ -1.44
POLR2AP24928 PPIAP9-201ENST00000403866 498 ntBASIC6.08□□□□□ -1.44
POLR2AP24928 AL354868.1-201ENST00000417077 482 ntBASIC6.08□□□□□ -1.44
POLR2AP24928 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.08□□□□□ -1.44
POLR2AP24928 TRGV7-201ENST00000427089 353 ntBASIC6.08□□□□□ -1.44
POLR2AP24928 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.08□□□□□ -1.44
POLR2AP24928 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.08□□□□□ -1.44
POLR2AP24928 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC6.08□□□□□ -1.44
POLR2AP24928 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
POLR2AP24928 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.08□□□□□ -1.44
POLR2AP24928 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC6.08□□□□□ -1.44
POLR2AP24928 AP000797.2-201ENST00000475768 606 ntBASIC6.08□□□□□ -1.44
POLR2AP24928 RPL7P40-201ENST00000481703 745 ntBASIC6.08□□□□□ -1.44
POLR2AP24928 RN7SL814P-201ENST00000487715 300 ntBASIC6.08□□□□□ -1.44
POLR2AP24928 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.08□□□□□ -1.44
POLR2AP24928 RN7SKP287-201ENST00000516546 266 ntBASIC6.08□□□□□ -1.44
POLR2AP24928 RNA5SP392-201ENST00000516905 112 ntBASIC6.08□□□□□ -1.44
POLR2AP24928 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
POLR2AP24928 ZKSCAN7P1-201ENST00000543668 673 ntBASIC6.08□□□□□ -1.44
POLR2AP24928 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.08□□□□□ -1.44
POLR2AP24928 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.08□□□□□ -1.44
POLR2AP24928 MIR4509-3-201ENST00000578671 94 ntBASIC6.08□□□□□ -1.44
POLR2AP24928 MIR4509-2-201ENST00000583920 94 ntBASIC6.08□□□□□ -1.44
POLR2AP24928 AL512782.1-201ENST00000603093 364 ntBASIC6.08□□□□□ -1.44
POLR2AP24928 MIR4509-1-201ENST00000618224 94 ntBASIC6.08□□□□□ -1.44
POLR2AP24928 AP003485.2-201ENST00000623636 610 ntBASIC6.08□□□□□ -1.44
POLR2AP24928 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
POLR2AP24928 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
POLR2AP24928 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
POLR2AP24928 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.08□□□□□ -1.44
POLR2AP24928 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
POLR2AP24928 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
POLR2AP24928 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
POLR2AP24928 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
POLR2AP24928 PCF11-AS1-201ENST00000602322 1516 ntBASIC6.08□□□□□ -1.44
POLR2AP24928 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.08□□□□□ -1.44
POLR2AP24928 MTND5P31-201ENST00000419366 1374 ntBASIC6.08□□□□□ -1.44
POLR2AP24928 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.08□□□□□ -1.44
POLR2AP24928 RNA5SP191-201ENST00000362585 102 ntBASIC6.07□□□□□ -1.44
POLR2AP24928 AL121977.1-201ENST00000401636 979 ntBASIC6.07□□□□□ -1.44
POLR2AP24928 ZNF602P-201ENST00000405929 924 ntBASIC6.07□□□□□ -1.44
POLR2AP24928 MTCO2P8-201ENST00000412213 658 ntBASIC6.07□□□□□ -1.44
POLR2AP24928 AL512504.1-201ENST00000415494 778 ntBASIC6.07□□□□□ -1.44
POLR2AP24928 AC073143.1-201ENST00000436316 395 ntBASIC6.07□□□□□ -1.44
POLR2AP24928 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC6.07□□□□□ -1.44
POLR2AP24928 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC6.07□□□□□ -1.44
POLR2AP24928 AC096992.1-201ENST00000459808 709 ntBASIC6.07□□□□□ -1.44
POLR2AP24928 IGKV1-32-201ENST00000519290 311 ntBASIC6.07□□□□□ -1.44
POLR2AP24928 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC6.07□□□□□ -1.44
POLR2AP24928 AC106785.3-201ENST00000564064 847 ntBASIC6.07□□□□□ -1.44
POLR2AP24928 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC6.07□□□□□ -1.44
POLR2AP24928 AC068790.2-201ENST00000602601 557 ntBASIC6.07□□□□□ -1.44
POLR2AP24928 MLECP1-201ENST00000615893 709 ntBASIC6.07□□□□□ -1.44
POLR2AP24928 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC6.07□□□□□ -1.44
POLR2AP24928 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
POLR2AP24928 SAMMSON-226ENST00000642089 1582 ntBASIC6.07□□□□□ -1.44
POLR2AP24928 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
POLR2AP24928 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.07□□□□□ -1.44
POLR2AP24928 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
POLR2AP24928 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
POLR2AP24928 AL355578.1-201ENST00000607405 1328 ntBASIC6.07□□□□□ -1.44
POLR2AP24928 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
POLR2AP24928 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.07□□□□□ -1.44
POLR2AP24928 RNU6-1257P-201ENST00000384625 110 ntBASIC6.07□□□□□ -1.44
POLR2AP24928 MIR7-1-201ENST00000384871 110 ntBASIC6.07□□□□□ -1.44
POLR2AP24928 AL139039.2-201ENST00000407436 479 ntBASIC6.07□□□□□ -1.44
POLR2AP24928 NOP56P2-201ENST00000447491 769 ntBASIC6.07□□□□□ -1.44
POLR2AP24928 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6.07□□□□□ -1.44
POLR2AP24928 RN7SL443P-201ENST00000464331 290 ntBASIC6.07□□□□□ -1.44
POLR2AP24928 AC091153.1-201ENST00000466297 402 ntBASIC6.07□□□□□ -1.44
POLR2AP24928 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.07□□□□□ -1.44
POLR2AP24928 PRELID3BP6-201ENST00000503839 571 ntBASIC6.07□□□□□ -1.44
POLR2AP24928 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC6.07□□□□□ -1.44
POLR2AP24928 RN7SKP276-201ENST00000516242 268 ntBASIC6.07□□□□□ -1.44
POLR2AP24928 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC6.07□□□□□ -1.44
POLR2AP24928 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC6.07□□□□□ -1.44
POLR2AP24928 DERA-209ENST00000532964 854 ntTSL 5 BASIC6.07□□□□□ -1.44
POLR2AP24928 RNF138P2-201ENST00000603490 592 ntBASIC6.07□□□□□ -1.44
POLR2AP24928 AC105254.2-201ENST00000603636 436 ntBASIC6.07□□□□□ -1.44
POLR2AP24928 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.07□□□□□ -1.44
POLR2AP24928 AC080013.6-201ENST00000606185 215 ntBASIC6.07□□□□□ -1.44
POLR2AP24928 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.07□□□□□ -1.44
POLR2AP24928 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC6.07□□□□□ -1.44
POLR2AP24928 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
POLR2AP24928 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
POLR2AP24928 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.07□□□□□ -1.44
POLR2AP24928 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
POLR2AP24928 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
POLR2AP24928 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
POLR2AP24928 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.06□□□□□ -1.44
POLR2AP24928 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
POLR2AP24928 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
POLR2AP24928 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.06□□□□□ -1.44
POLR2AP24928 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.06□□□□□ -1.44
POLR2AP24928 NR1H5P-201ENST00000452683 1377 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 AC079097.1-201ENST00000512187 1399 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms