Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.41□□□□□ -1.7
USF1P22415 AC134349.2-201ENST00000535136 910 ntBASIC4.41□□□□□ -1.7
USF1P22415 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.41□□□□□ -1.7
USF1P22415 AP002373.2-201ENST00000541631 1060 ntBASIC4.41□□□□□ -1.7
USF1P22415 DUX4L52-201ENST00000549363 777 ntBASIC4.41□□□□□ -1.7
USF1P22415 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.41□□□□□ -1.7
USF1P22415 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.41□□□□□ -1.7
USF1P22415 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.41□□□□□ -1.7
USF1P22415 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.41□□□□□ -1.7
USF1P22415 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.41□□□□□ -1.7
USF1P22415 AC093799.2-201ENST00000610062 578 ntBASIC4.41□□□□□ -1.7
USF1P22415 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
USF1P22415 AL158062.1-201ENST00000619632 745 ntBASIC4.41□□□□□ -1.7
USF1P22415 AC074140.1-201ENST00000621617 208 ntBASIC4.41□□□□□ -1.7
USF1P22415 AC091953.3-201ENST00000623220 236 ntBASIC4.41□□□□□ -1.7
USF1P22415 FRG1EP-201ENST00000634469 770 ntBASIC4.41□□□□□ -1.7
USF1P22415 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
USF1P22415 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
USF1P22415 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.41□□□□□ -1.7
USF1P22415 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USF1P22415 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.41□□□□□ -1.7
USF1P22415 AC100757.1-201ENST00000616872 1835 ntBASIC4.41□□□□□ -1.7
USF1P22415 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
USF1P22415 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USF1P22415 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.41□□□□□ -1.7
USF1P22415 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
USF1P22415 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
USF1P22415 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.41□□□□□ -1.7
USF1P22415 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.41□□□□□ -1.7
USF1P22415 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
USF1P22415 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
USF1P22415 AC123912.3-201ENST00000600907 1367 ntBASIC4.4□□□□□ -1.7
USF1P22415 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
USF1P22415 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.4□□□□□ -1.7
USF1P22415 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.4□□□□□ -1.7
USF1P22415 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.4□□□□□ -1.7
USF1P22415 INTS6P1-201ENST00000504674 2530 ntBASIC4.4□□□□□ -1.7
USF1P22415 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
USF1P22415 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
USF1P22415 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
USF1P22415 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
USF1P22415 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
USF1P22415 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.4□□□□□ -1.7
USF1P22415 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
USF1P22415 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
USF1P22415 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.4□□□□□ -1.71
USF1P22415 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
USF1P22415 SNORA51.8-201ENST00000384234 132 ntBASIC4.4□□□□□ -1.71
USF1P22415 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
USF1P22415 SEPT7P8-201ENST00000413308 775 ntBASIC4.4□□□□□ -1.71
USF1P22415 AC096644.3-201ENST00000416788 338 ntBASIC4.4□□□□□ -1.71
USF1P22415 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
USF1P22415 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
USF1P22415 AC106901.1-201ENST00000425086 698 ntBASIC4.4□□□□□ -1.71
USF1P22415 RPL7AP49-201ENST00000429522 581 ntBASIC4.4□□□□□ -1.71
USF1P22415 AL591438.1-201ENST00000433508 581 ntBASIC4.4□□□□□ -1.71
USF1P22415 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.4□□□□□ -1.71
USF1P22415 TCEA1P3-201ENST00000443005 880 ntBASIC4.4□□□□□ -1.71
USF1P22415 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.4□□□□□ -1.71
USF1P22415 AC092647.2-201ENST00000452998 253 ntBASIC4.4□□□□□ -1.71
USF1P22415 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.4□□□□□ -1.71
USF1P22415 RPS3AP53-201ENST00000454716 778 ntBASIC4.4□□□□□ -1.71
USF1P22415 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.4□□□□□ -1.71
USF1P22415 AC097484.1-201ENST00000471148 389 ntBASIC4.4□□□□□ -1.71
USF1P22415 RPS24P16-201ENST00000497294 392 ntBASIC4.4□□□□□ -1.71
USF1P22415 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.4□□□□□ -1.71
USF1P22415 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.4□□□□□ -1.71
USF1P22415 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.4□□□□□ -1.71
USF1P22415 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.4□□□□□ -1.71
USF1P22415 OR5AZ1P-201ENST00000527448 943 ntBASIC4.4□□□□□ -1.71
USF1P22415 OR8G3P-201ENST00000533406 921 ntBASIC4.4□□□□□ -1.71
USF1P22415 AP001804.2-201ENST00000533932 910 ntBASIC4.4□□□□□ -1.71
USF1P22415 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.4□□□□□ -1.71
USF1P22415 AL358913.1-201ENST00000554342 121 ntBASIC4.4□□□□□ -1.71
USF1P22415 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
USF1P22415 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.4□□□□□ -1.71
USF1P22415 AC009237.13-201ENST00000603193 276 ntBASIC4.4□□□□□ -1.71
USF1P22415 AC009027.1-201ENST00000604510 479 ntBASIC4.4□□□□□ -1.71
USF1P22415 SNORA35B-201ENST00000607417 129 ntBASIC4.4□□□□□ -1.71
USF1P22415 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.4□□□□□ -1.71
USF1P22415 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.4□□□□□ -1.71
USF1P22415 AC135068.12-201ENST00000637370 931 ntBASIC4.4□□□□□ -1.71
USF1P22415 AC092747.4-201ENST00000620519 1861 ntBASIC4.4□□□□□ -1.71
USF1P22415 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.4□□□□□ -1.71
USF1P22415 PANDAR-201ENST00000629595 1506 ntBASIC4.4□□□□□ -1.71
USF1P22415 AC015813.6-201ENST00000624409 5808 ntBASIC4.4□□□□□ -1.71
USF1P22415 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.4□□□□□ -1.71
USF1P22415 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
USF1P22415 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.71
USF1P22415 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.4□□□□□ -1.71
USF1P22415 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.4□□□□□ -1.71
USF1P22415 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.4□□□□□ -1.71
USF1P22415 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
USF1P22415 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
USF1P22415 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
USF1P22415 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
USF1P22415 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
USF1P22415 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.39□□□□□ -1.71
USF1P22415 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
USF1P22415 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms