Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMGA1P17096 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5□□□□□ -1.61
HMGA1P17096 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
HMGA1P17096 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5□□□□□ -1.61
HMGA1P17096 SAMMSON-210ENST00000641260 1308 ntBASIC5□□□□□ -1.61
HMGA1P17096 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5□□□□□ -1.61
HMGA1P17096 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
HMGA1P17096 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HMGA1P17096 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
HMGA1P17096 MAPK10-263ENST00000641052 4307 ntBASIC5□□□□□ -1.61
HMGA1P17096 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
HMGA1P17096 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
HMGA1P17096 RBPJP2-201ENST00000618187 1444 ntBASIC5□□□□□ -1.61
HMGA1P17096 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5□□□□□ -1.61
HMGA1P17096 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HMGA1P17096 MAPK10-304ENST00000641341 3984 ntBASIC5□□□□□ -1.61
HMGA1P17096 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
HMGA1P17096 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HMGA1P17096 OR4K15-201ENST00000305051 1216 ntBASIC5□□□□□ -1.61
HMGA1P17096 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5□□□□□ -1.61
HMGA1P17096 OR51B3P-201ENST00000412287 913 ntBASIC5□□□□□ -1.61
HMGA1P17096 ATG4AP1-201ENST00000416893 538 ntBASIC5□□□□□ -1.61
HMGA1P17096 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5□□□□□ -1.61
HMGA1P17096 AC013429.2-201ENST00000418798 781 ntBASIC5□□□□□ -1.61
HMGA1P17096 VTI1BP4-201ENST00000427516 527 ntBASIC5□□□□□ -1.61
HMGA1P17096 MRPL35P2-201ENST00000448009 511 ntBASIC5□□□□□ -1.61
HMGA1P17096 CYCSP42-201ENST00000450823 238 ntBASIC5□□□□□ -1.61
HMGA1P17096 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5□□□□□ -1.61
HMGA1P17096 AC021660.1-201ENST00000465006 554 ntBASIC5□□□□□ -1.61
HMGA1P17096 OR52A4P-201ENST00000472867 958 ntBASIC5□□□□□ -1.61
HMGA1P17096 RN7SL481P-201ENST00000477764 299 ntBASIC5□□□□□ -1.61
HMGA1P17096 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5□□□□□ -1.61
HMGA1P17096 EEF1A1P25-201ENST00000495704 1267 ntBASIC5□□□□□ -1.61
HMGA1P17096 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5□□□□□ -1.61
HMGA1P17096 RNU1-6P-201ENST00000516290 144 ntBASIC5□□□□□ -1.61
HMGA1P17096 RN7SKP92-201ENST00000517266 244 ntBASIC5□□□□□ -1.61
HMGA1P17096 AC138832.1-201ENST00000522871 556 ntBASIC5□□□□□ -1.61
HMGA1P17096 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5□□□□□ -1.61
HMGA1P17096 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5□□□□□ -1.61
HMGA1P17096 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5□□□□□ -1.61
HMGA1P17096 AC090286.3-201ENST00000573133 187 ntBASIC5□□□□□ -1.61
HMGA1P17096 AC027216.1-201ENST00000577726 685 ntBASIC5□□□□□ -1.61
HMGA1P17096 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5□□□□□ -1.61
HMGA1P17096 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5□□□□□ -1.61
HMGA1P17096 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5□□□□□ -1.61
HMGA1P17096 BX005214.3-202ENST00000619809 325 ntBASIC5□□□□□ -1.61
HMGA1P17096 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5□□□□□ -1.61
HMGA1P17096 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5□□□□□ -1.61
HMGA1P17096 AC073869.10-201ENST00000642016 354 ntBASIC5□□□□□ -1.61
HMGA1P17096 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HMGA1P17096 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5□□□□□ -1.61
HMGA1P17096 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC5□□□□□ -1.61
HMGA1P17096 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5□□□□□ -1.61
HMGA1P17096 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5□□□□□ -1.61
HMGA1P17096 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HMGA1P17096 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
HMGA1P17096 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGA1P17096 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HMGA1P17096 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGA1P17096 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGA1P17096 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HMGA1P17096 SNORD113.2-201ENST00000364166 89 ntBASIC4.99□□□□□ -1.61
HMGA1P17096 RNU1-82P-201ENST00000390851 165 ntBASIC4.99□□□□□ -1.61
HMGA1P17096 AC136624.1-201ENST00000400791 413 ntBASIC4.99□□□□□ -1.61
HMGA1P17096 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HMGA1P17096 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.99□□□□□ -1.61
HMGA1P17096 RPS27AP7-201ENST00000422792 455 ntBASIC4.99□□□□□ -1.61
HMGA1P17096 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.99□□□□□ -1.61
HMGA1P17096 DNAJC19P7-201ENST00000428811 344 ntBASIC4.99□□□□□ -1.61
HMGA1P17096 AC092162.1-201ENST00000432828 434 ntBASIC4.99□□□□□ -1.61
HMGA1P17096 AL451139.1-201ENST00000434718 346 ntBASIC4.99□□□□□ -1.61
HMGA1P17096 AC097523.2-201ENST00000435551 652 ntBASIC4.99□□□□□ -1.61
HMGA1P17096 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.99□□□□□ -1.61
HMGA1P17096 AL356981.1-201ENST00000454879 684 ntBASIC4.99□□□□□ -1.61
HMGA1P17096 AC093166.2-201ENST00000455969 1017 ntBASIC4.99□□□□□ -1.61
HMGA1P17096 snoU13.1-201ENST00000459157 104 ntBASIC4.99□□□□□ -1.61
HMGA1P17096 DEFB109A-201ENST00000482450 265 ntBASIC4.99□□□□□ -1.61
HMGA1P17096 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.99□□□□□ -1.61
HMGA1P17096 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.99□□□□□ -1.61
HMGA1P17096 RNA5SP230-201ENST00000517039 122 ntBASIC4.99□□□□□ -1.61
HMGA1P17096 IGHVIII-47-1-201ENST00000518187 331 ntBASIC4.99□□□□□ -1.61
HMGA1P17096 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.99□□□□□ -1.61
HMGA1P17096 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.99□□□□□ -1.61
HMGA1P17096 AC006349.1-201ENST00000555526 235 ntBASIC4.99□□□□□ -1.61
HMGA1P17096 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.99□□□□□ -1.61
HMGA1P17096 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.99□□□□□ -1.61
HMGA1P17096 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.99□□□□□ -1.61
HMGA1P17096 AL023583.1-201ENST00000607518 1143 ntBASIC4.99□□□□□ -1.61
HMGA1P17096 AC019193.2-201ENST00000610012 634 ntBASIC4.99□□□□□ -1.61
HMGA1P17096 FRG1EP-201ENST00000634469 770 ntBASIC4.99□□□□□ -1.61
HMGA1P17096 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.99□□□□□ -1.61
HMGA1P17096 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.99□□□□□ -1.61
HMGA1P17096 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGA1P17096 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGA1P17096 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGA1P17096 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGA1P17096 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGA1P17096 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGA1P17096 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGA1P17096 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms