Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.64□□□□□ -1.51
RB1P06400 AC018552.1-201ENST00000562099 811 ntBASIC5.64□□□□□ -1.51
RB1P06400 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RB1P06400 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.64□□□□□ -1.51
RB1P06400 SNORD39.2-201ENST00000579995 76 ntBASIC5.64□□□□□ -1.51
RB1P06400 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.64□□□□□ -1.51
RB1P06400 AC060780.2-201ENST00000589047 198 ntBASIC5.64□□□□□ -1.51
RB1P06400 AL161616.1-201ENST00000611867 286 ntBASIC5.64□□□□□ -1.51
RB1P06400 AC079298.2-201ENST00000623885 459 ntBASIC5.64□□□□□ -1.51
RB1P06400 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.64□□□□□ -1.51
RB1P06400 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.64□□□□□ -1.51
RB1P06400 AC006453.5-201ENST00000636451 619 ntBASIC5.64□□□□□ -1.51
RB1P06400 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RB1P06400 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RB1P06400 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.64□□□□□ -1.51
RB1P06400 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.64□□□□□ -1.51
RB1P06400 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.64□□□□□ -1.51
RB1P06400 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.64□□□□□ -1.51
RB1P06400 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.64□□□□□ -1.51
RB1P06400 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RB1P06400 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RB1P06400 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RB1P06400 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RB1P06400 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RB1P06400 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RB1P06400 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.63□□□□□ -1.51
RB1P06400 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RB1P06400 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
RB1P06400 AC093849.1-201ENST00000563631 2209 ntBASIC5.63□□□□□ -1.51
RB1P06400 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
RB1P06400 AC007996.1-201ENST00000620414 2821 ntBASIC5.63□□□□□ -1.51
RB1P06400 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RB1P06400 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
RB1P06400 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.63□□□□□ -1.51
RB1P06400 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
RB1P06400 RN7SKP95-201ENST00000362860 303 ntBASIC5.63□□□□□ -1.51
RB1P06400 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
RB1P06400 RN7SKP17-201ENST00000411242 351 ntBASIC5.63□□□□□ -1.51
RB1P06400 AC002524.1-201ENST00000411687 547 ntBASIC5.63□□□□□ -1.51
RB1P06400 HSPD1P12-201ENST00000429127 1069 ntBASIC5.63□□□□□ -1.51
RB1P06400 AC091390.1-201ENST00000433904 331 ntBASIC5.63□□□□□ -1.51
RB1P06400 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.63□□□□□ -1.51
RB1P06400 AC079168.1-201ENST00000458741 345 ntBASIC5.63□□□□□ -1.51
RB1P06400 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RB1P06400 HMGN2P25-201ENST00000486956 268 ntBASIC5.63□□□□□ -1.51
RB1P06400 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.63□□□□□ -1.51
RB1P06400 RPS17P5-201ENST00000498293 408 ntBASIC5.63□□□□□ -1.51
RB1P06400 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.63□□□□□ -1.51
RB1P06400 SNORA70.11-201ENST00000515987 138 ntBASIC5.63□□□□□ -1.51
RB1P06400 SNORA70.13-201ENST00000516116 138 ntBASIC5.63□□□□□ -1.51
RB1P06400 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RB1P06400 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.63□□□□□ -1.51
RB1P06400 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.63□□□□□ -1.51
RB1P06400 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RB1P06400 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.63□□□□□ -1.51
RB1P06400 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.63□□□□□ -1.51
RB1P06400 AL358913.1-201ENST00000554342 121 ntBASIC5.63□□□□□ -1.51
RB1P06400 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RB1P06400 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.63□□□□□ -1.51
RB1P06400 LINC00557-201ENST00000563184 1279 ntBASIC5.63□□□□□ -1.51
RB1P06400 AC009117.1-201ENST00000563948 554 ntBASIC5.63□□□□□ -1.51
RB1P06400 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.63□□□□□ -1.51
RB1P06400 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.63□□□□□ -1.51
RB1P06400 MIR4737-201ENST00000583979 81 ntBASIC5.63□□□□□ -1.51
RB1P06400 BMS1P7-201ENST00000602440 1052 ntBASIC5.63□□□□□ -1.51
RB1P06400 AL356490.1-201ENST00000623079 479 ntBASIC5.63□□□□□ -1.51
RB1P06400 AC026523.2-201ENST00000625039 7739 ntBASIC5.63□□□□□ -1.51
RB1P06400 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.63□□□□□ -1.51
RB1P06400 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RB1P06400 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.63□□□□□ -1.51
RB1P06400 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RB1P06400 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RB1P06400 AC114774.1-201ENST00000507410 1770 ntBASIC5.62□□□□□ -1.51
RB1P06400 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RB1P06400 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RB1P06400 SDAD1P1-202ENST00000524156 2051 ntBASIC5.62□□□□□ -1.51
RB1P06400 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
RB1P06400 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.62□□□□□ -1.51
RB1P06400 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.62□□□□□ -1.51
RB1P06400 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
RB1P06400 RNU6-249P-201ENST00000363016 102 ntBASIC5.62□□□□□ -1.51
RB1P06400 RNA5SP455-201ENST00000365190 119 ntBASIC5.62□□□□□ -1.51
RB1P06400 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RB1P06400 GAPDHP15-201ENST00000398586 975 ntBASIC5.62□□□□□ -1.51
RB1P06400 UBE2V1P15-201ENST00000407776 448 ntBASIC5.62□□□□□ -1.51
RB1P06400 CHEK2P3-201ENST00000416118 248 ntBASIC5.62□□□□□ -1.51
RB1P06400 MTCYBP7-201ENST00000419540 1134 ntBASIC5.62□□□□□ -1.51
RB1P06400 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.62□□□□□ -1.51
RB1P06400 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.62□□□□□ -1.51
RB1P06400 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.62□□□□□ -1.51
RB1P06400 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.62□□□□□ -1.51
RB1P06400 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.62□□□□□ -1.51
RB1P06400 PSAT1P4-201ENST00000466500 526 ntBASIC5.62□□□□□ -1.51
RB1P06400 AC058823.1-201ENST00000485315 474 ntBASIC5.62□□□□□ -1.51
RB1P06400 RN7SL244P-201ENST00000493405 297 ntBASIC5.62□□□□□ -1.51
RB1P06400 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.62□□□□□ -1.51
RB1P06400 ST13P12-201ENST00000508958 1094 ntBASIC5.62□□□□□ -1.51
RB1P06400 AC021006.3-201ENST00000530771 192 ntBASIC5.62□□□□□ -1.51
RB1P06400 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.62□□□□□ -1.51
RB1P06400 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms