Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RPS23P9-201ENST00000448848 438 ntBASIC6.28□□□□□ -1.4
HLA-DOAP06340 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DOAP06340 AC090114.3-201ENST00000479267 829 ntBASIC6.28□□□□□ -1.4
HLA-DOAP06340 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 AC234772.3-201ENST00000602277 528 ntBASIC6.28□□□□□ -1.4
HLA-DOAP06340 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 AC004241.3-201ENST00000611728 517 ntBASIC6.28□□□□□ -1.4
HLA-DOAP06340 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 AL590396.4-201ENST00000636779 956 ntBASIC6.28□□□□□ -1.4
HLA-DOAP06340 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DOAP06340 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DOAP06340 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DOAP06340 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DOAP06340 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DOAP06340 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.4
HLA-DOAP06340 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
HLA-DOAP06340 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.27□□□□□ -1.41
HLA-DOAP06340 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.27□□□□□ -1.41
HLA-DOAP06340 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
HLA-DOAP06340 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DOAP06340 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.27□□□□□ -1.41
HLA-DOAP06340 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
HLA-DOAP06340 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DOAP06340 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DOAP06340 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.27□□□□□ -1.41
HLA-DOAP06340 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DOAP06340 RNU6-1331P-201ENST00000363658 106 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 RNU1-146P-201ENST00000364015 165 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DOAP06340 RNY3P9-201ENST00000384727 106 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 RPL22P22-201ENST00000395439 379 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 PPIAP9-201ENST00000403866 498 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.27□□□□□ -1.41
HLA-DOAP06340 AC013262.1-201ENST00000426710 252 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.27□□□□□ -1.41
HLA-DOAP06340 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.27□□□□□ -1.41
HLA-DOAP06340 RPL7P61-201ENST00000451721 751 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 CABYRP1-201ENST00000465493 1045 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 AC090589.1-201ENST00000473109 362 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC6.27□□□□□ -1.41
HLA-DOAP06340 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC6.27□□□□□ -1.41
HLA-DOAP06340 RPS23P1-201ENST00000491662 432 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 NDUFB5P1-201ENST00000508134 564 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.27□□□□□ -1.41
HLA-DOAP06340 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC6.27□□□□□ -1.41
HLA-DOAP06340 SCARNA20.4-201ENST00000516969 131 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 AC012400.1-201ENST00000518452 381 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 OR4V1P-201ENST00000525394 1140 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 AP003066.2-201ENST00000529375 555 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DOAP06340 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC6.27□□□□□ -1.41
HLA-DOAP06340 AC009962.1-201ENST00000567327 3813 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 MIR4509-3-201ENST00000578671 94 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 MIR4509-2-201ENST00000583920 94 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 PRELID3BP3-201ENST00000584963 545 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.27□□□□□ -1.41
HLA-DOAP06340 AP002884.5-201ENST00000595053 1132 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.27□□□□□ -1.41
HLA-DOAP06340 AC244107.2-201ENST00000611773 76 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 AL356752.1-201ENST00000615844 593 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 MIR4509-1-201ENST00000618224 94 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 U6.48-201ENST00000618523 106 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.27□□□□□ -1.41
HLA-DOAP06340 AP003400.3-201ENST00000624904 346 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 AP003399.1-201ENST00000637534 361 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DOAP06340 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.27□□□□□ -1.41
HLA-DOAP06340 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.27□□□□□ -1.41
HLA-DOAP06340 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.27□□□□□ -1.41
HLA-DOAP06340 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.27□□□□□ -1.41
HLA-DOAP06340 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DOAP06340 AC083899.1-201ENST00000454465 3819 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 CASC19-281ENST00000642118 1554 ntBASIC6.27□□□□□ -1.41
HLA-DOAP06340 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DOAP06340 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 AC112255.1-201ENST00000624070 2493 ntBASIC6.26□□□□□ -1.41
HLA-DOAP06340 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DOAP06340 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DOAP06340 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DOAP06340 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms