Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.74□□□□□ -1.49
COL2A1P02458 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
COL2A1P02458 AC068446.1-201ENST00000556425 1549 ntBASIC5.74□□□□□ -1.49
COL2A1P02458 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL2A1P02458 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
COL2A1P02458 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL2A1P02458 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
COL2A1P02458 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL2A1P02458 AL592148.3-201ENST00000608771 2646 ntBASIC5.74□□□□□ -1.49
COL2A1P02458 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
COL2A1P02458 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.73□□□□□ -1.49
COL2A1P02458 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL2A1P02458 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL2A1P02458 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL2A1P02458 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.73□□□□□ -1.49
COL2A1P02458 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
COL2A1P02458 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
COL2A1P02458 Z98755.1-201ENST00000407015 1384 ntBASIC5.73□□□□□ -1.49
COL2A1P02458 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.73□□□□□ -1.49
COL2A1P02458 AC122718.1-201ENST00000439448 744 ntBASIC5.73□□□□□ -1.49
COL2A1P02458 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.73□□□□□ -1.49
COL2A1P02458 FAM133DP-201ENST00000464802 691 ntBASIC5.73□□□□□ -1.49
COL2A1P02458 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.73□□□□□ -1.49
COL2A1P02458 AC111000.3-201ENST00000508057 576 ntBASIC5.73□□□□□ -1.49
COL2A1P02458 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL2A1P02458 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.73□□□□□ -1.49
COL2A1P02458 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.73□□□□□ -1.49
COL2A1P02458 SCARNA9-201ENST00000530422 353 ntBASIC5.73□□□□□ -1.49
COL2A1P02458 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.73□□□□□ -1.49
COL2A1P02458 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.73□□□□□ -1.49
COL2A1P02458 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL2A1P02458 AC021483.2-201ENST00000567415 758 ntBASIC5.73□□□□□ -1.49
COL2A1P02458 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.73□□□□□ -1.49
COL2A1P02458 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.73□□□□□ -1.49
COL2A1P02458 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.73□□□□□ -1.49
COL2A1P02458 AL669831.5-218ENST00000591702 1873 ntBASIC5.73□□□□□ -1.49
COL2A1P02458 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL2A1P02458 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.72□□□□□ -1.49
COL2A1P02458 MAPK10-263ENST00000641052 4307 ntBASIC5.72□□□□□ -1.49
COL2A1P02458 TRIM51GP-201ENST00000534741 1350 ntBASIC5.72□□□□□ -1.49
COL2A1P02458 TTC41P-205ENST00000551270 3963 ntBASIC5.72□□□□□ -1.49
COL2A1P02458 MIR129-1-201ENST00000384972 72 ntBASIC5.72□□□□□ -1.49
COL2A1P02458 ELOCP19-201ENST00000411919 318 ntBASIC5.72□□□□□ -1.49
COL2A1P02458 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.72□□□□□ -1.49
COL2A1P02458 AL355994.1-201ENST00000424379 260 ntBASIC5.72□□□□□ -1.49
COL2A1P02458 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.72□□□□□ -1.49
COL2A1P02458 MTND4LP12-201ENST00000448237 295 ntBASIC5.72□□□□□ -1.49
COL2A1P02458 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.72□□□□□ -1.49
COL2A1P02458 AC093720.1-201ENST00000505681 714 ntBASIC5.72□□□□□ -1.49
COL2A1P02458 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.72□□□□□ -1.49
COL2A1P02458 RNU1-6P-201ENST00000516290 144 ntBASIC5.72□□□□□ -1.49
COL2A1P02458 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.72□□□□□ -1.49
COL2A1P02458 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.72□□□□□ -1.49
COL2A1P02458 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.72□□□□□ -1.49
COL2A1P02458 AP001002.2-201ENST00000625137 386 ntBASIC5.72□□□□□ -1.49
COL2A1P02458 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL2A1P02458 AL442639.1-201ENST00000625030 1899 ntBASIC5.72□□□□□ -1.49
COL2A1P02458 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.72□□□□□ -1.49
COL2A1P02458 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.72□□□□□ -1.49
COL2A1P02458 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL2A1P02458 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL2A1P02458 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.72□□□□□ -1.49
COL2A1P02458 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
COL2A1P02458 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.71□□□□□ -1.49
COL2A1P02458 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
COL2A1P02458 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
COL2A1P02458 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.71□□□□□ -1.49
COL2A1P02458 AC073052.1-201ENST00000440417 714 ntBASIC5.71□□□□□ -1.49
COL2A1P02458 OR52A4P-201ENST00000472867 958 ntBASIC5.71□□□□□ -1.49
COL2A1P02458 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.71□□□□□ -1.49
COL2A1P02458 PPM1AP1-201ENST00000502740 1135 ntBASIC5.71□□□□□ -1.49
COL2A1P02458 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.71□□□□□ -1.49
COL2A1P02458 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.71□□□□□ -1.49
COL2A1P02458 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.71□□□□□ -1.49
COL2A1P02458 GLRXP2-201ENST00000555594 321 ntBASIC5.71□□□□□ -1.49
COL2A1P02458 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.71□□□□□ -1.49
COL2A1P02458 AL139041.1-201ENST00000605480 610 ntBASIC5.71□□□□□ -1.49
COL2A1P02458 AC243960.7-201ENST00000623532 707 ntBASIC5.71□□□□□ -1.49
COL2A1P02458 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.71□□□□□ -1.49
COL2A1P02458 MAPK10-328ENST00000641553 4009 ntBASIC5.71□□□□□ -1.5
COL2A1P02458 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
COL2A1P02458 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL2A1P02458 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.71□□□□□ -1.5
COL2A1P02458 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL2A1P02458 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.71□□□□□ -1.5
COL2A1P02458 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL2A1P02458 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL2A1P02458 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
COL2A1P02458 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL2A1P02458 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
COL2A1P02458 SNORD113.2-201ENST00000364166 89 ntBASIC5.71□□□□□ -1.5
COL2A1P02458 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL2A1P02458 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
COL2A1P02458 RN7SKP106-201ENST00000410832 272 ntBASIC5.71□□□□□ -1.5
COL2A1P02458 VN1R37P-201ENST00000419096 748 ntBASIC5.71□□□□□ -1.5
COL2A1P02458 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
COL2A1P02458 TDGF1P1-201ENST00000445734 527 ntBASIC5.71□□□□□ -1.5
COL2A1P02458 EIF2S2P2-201ENST00000447161 982 ntBASIC5.71□□□□□ -1.5
COL2A1P02458 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.71□□□□□ -1.5
COL2A1P02458 AC022034.3-201ENST00000471393 478 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms