Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNFP01375 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNFP01375 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.8□□□□□ -1.64
TNFP01375 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNFP01375 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
TNFP01375 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.8□□□□□ -1.64
TNFP01375 SNORA56-201ENST00000383966 129 ntBASIC4.8□□□□□ -1.64
TNFP01375 RN7SKP100-201ENST00000411258 284 ntBASIC4.8□□□□□ -1.64
TNFP01375 NPM1P40-201ENST00000412758 733 ntBASIC4.8□□□□□ -1.64
TNFP01375 QRSL1P2-201ENST00000418582 964 ntBASIC4.8□□□□□ -1.64
TNFP01375 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.8□□□□□ -1.64
TNFP01375 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.8□□□□□ -1.64
TNFP01375 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.8□□□□□ -1.64
TNFP01375 AC093166.2-201ENST00000455969 1017 ntBASIC4.8□□□□□ -1.64
TNFP01375 GYG1P1-201ENST00000460864 698 ntBASIC4.8□□□□□ -1.64
TNFP01375 AC011005.3-201ENST00000491624 395 ntBASIC4.8□□□□□ -1.64
TNFP01375 AC008897.1-201ENST00000494006 347 ntBASIC4.8□□□□□ -1.64
TNFP01375 NIFKP7-201ENST00000503365 834 ntBASIC4.8□□□□□ -1.64
TNFP01375 ENPP7P9-201ENST00000514456 627 ntBASIC4.8□□□□□ -1.64
TNFP01375 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.8□□□□□ -1.64
TNFP01375 SOX5P1-201ENST00000524155 1127 ntBASIC4.8□□□□□ -1.64
TNFP01375 HIGD1AP5-201ENST00000529959 259 ntBASIC4.8□□□□□ -1.64
TNFP01375 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.8□□□□□ -1.64
TNFP01375 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.8□□□□□ -1.64
TNFP01375 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.8□□□□□ -1.64
TNFP01375 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
TNFP01375 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
TNFP01375 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TNFP01375 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.8□□□□□ -1.64
TNFP01375 NCLP2-201ENST00000416078 1462 ntBASIC4.8□□□□□ -1.64
TNFP01375 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.8□□□□□ -1.64
TNFP01375 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNFP01375 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
TNFP01375 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNFP01375 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TNFP01375 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
TNFP01375 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TNFP01375 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.79□□□□□ -1.64
TNFP01375 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TNFP01375 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
TNFP01375 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TNFP01375 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TNFP01375 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.79□□□□□ -1.64
TNFP01375 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TNFP01375 AC010132.2-201ENST00000295493 1043 ntBASIC4.79□□□□□ -1.64
TNFP01375 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TNFP01375 RPL21P67-201ENST00000402896 478 ntBASIC4.79□□□□□ -1.64
TNFP01375 AL357515.1-201ENST00000402967 542 ntBASIC4.79□□□□□ -1.64
TNFP01375 COX5BP7-201ENST00000414780 274 ntBASIC4.79□□□□□ -1.64
TNFP01375 AC019050.1-201ENST00000418508 492 ntBASIC4.79□□□□□ -1.64
TNFP01375 AC013429.2-201ENST00000418798 781 ntBASIC4.79□□□□□ -1.64
TNFP01375 AC004074.1-201ENST00000421810 1063 ntBASIC4.79□□□□□ -1.64
TNFP01375 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TNFP01375 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.79□□□□□ -1.64
TNFP01375 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.79□□□□□ -1.64
TNFP01375 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC4.79□□□□□ -1.64
TNFP01375 AC073264.2-201ENST00000448886 166 ntBASIC4.79□□□□□ -1.64
TNFP01375 TPT1P13-201ENST00000449760 499 ntBASIC4.79□□□□□ -1.64
TNFP01375 PRPF38AP1-201ENST00000451976 933 ntBASIC4.79□□□□□ -1.64
TNFP01375 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.79□□□□□ -1.64
TNFP01375 RPS5P7-201ENST00000456664 608 ntBASIC4.79□□□□□ -1.64
TNFP01375 RPS29P33-201ENST00000456717 146 ntBASIC4.79□□□□□ -1.64
TNFP01375 DEFB109A-201ENST00000482450 265 ntBASIC4.79□□□□□ -1.64
TNFP01375 IGLV2-34-201ENST00000490007 283 ntBASIC4.79□□□□□ -1.64
TNFP01375 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.79□□□□□ -1.64
TNFP01375 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.79□□□□□ -1.64
TNFP01375 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.79□□□□□ -1.64
TNFP01375 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.79□□□□□ -1.64
TNFP01375 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.79□□□□□ -1.64
TNFP01375 AP006289.1-201ENST00000538089 277 ntBASIC4.79□□□□□ -1.64
TNFP01375 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.79□□□□□ -1.64
TNFP01375 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TNFP01375 AC006349.1-201ENST00000555526 235 ntBASIC4.79□□□□□ -1.64
TNFP01375 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
TNFP01375 AL390726.5-202ENST00000564800 256 ntBASIC4.79□□□□□ -1.64
TNFP01375 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.79□□□□□ -1.64
TNFP01375 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.79□□□□□ -1.64
TNFP01375 AC010424.2-201ENST00000607594 443 ntBASIC4.79□□□□□ -1.64
TNFP01375 FAM27B-201ENST00000610601 213 ntBASIC4.79□□□□□ -1.64
TNFP01375 MIR6780A-201ENST00000615089 68 ntBASIC4.79□□□□□ -1.64
TNFP01375 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TNFP01375 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.79□□□□□ -1.64
TNFP01375 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TNFP01375 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TNFP01375 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TNFP01375 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.79□□□□□ -1.64
TNFP01375 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TNFP01375 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TNFP01375 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.78□□□□□ -1.64
TNFP01375 TRIM51GP-201ENST00000534741 1350 ntBASIC4.78□□□□□ -1.64
TNFP01375 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.78□□□□□ -1.64
TNFP01375 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
TNFP01375 AP005435.3-201ENST00000531260 3198 ntBASIC4.78□□□□□ -1.64
TNFP01375 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TNFP01375 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TNFP01375 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TNFP01375 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.78□□□□□ -1.64
TNFP01375 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.78□□□□□ -1.64
TNFP01375 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TNFP01375 AC079741.1-201ENST00000321498 212 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms