Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AL512329.2-201ENST00000607350 548 ntBASIC4.77□□□□□ -1.65
LMX1BO60663 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.77□□□□□ -1.65
LMX1BO60663 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.77□□□□□ -1.65
LMX1BO60663 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LMX1BO60663 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.77□□□□□ -1.65
LMX1BO60663 AC093671.1-201ENST00000624981 2929 ntBASIC4.77□□□□□ -1.65
LMX1BO60663 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LMX1BO60663 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LMX1BO60663 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LMX1BO60663 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LMX1BO60663 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LMX1BO60663 AC004158.1-201ENST00000564508 4319 ntBASIC4.77□□□□□ -1.65
LMX1BO60663 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LMX1BO60663 AL078621.3-201ENST00000623707 2042 ntBASIC4.77□□□□□ -1.65
LMX1BO60663 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LMX1BO60663 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
LMX1BO60663 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LMX1BO60663 MTCO1P15-201ENST00000529569 1526 ntBASIC4.77□□□□□ -1.65
LMX1BO60663 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
LMX1BO60663 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LMX1BO60663 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
LMX1BO60663 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
LMX1BO60663 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.76□□□□□ -1.65
LMX1BO60663 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LMX1BO60663 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.76□□□□□ -1.65
LMX1BO60663 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.76□□□□□ -1.65
LMX1BO60663 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.76□□□□□ -1.65
LMX1BO60663 OR4G1P-202ENST00000641173 1788 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LMX1BO60663 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
LMX1BO60663 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMX1BO60663 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMX1BO60663 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
LMX1BO60663 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMX1BO60663 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.76□□□□□ -1.65
LMX1BO60663 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMX1BO60663 SNORA16A-201ENST00000384342 137 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 VN1R51P-201ENST00000411675 945 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.76□□□□□ -1.65
LMX1BO60663 DPPA2P2-201ENST00000418220 897 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.76□□□□□ -1.65
LMX1BO60663 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LMX1BO60663 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.76□□□□□ -1.65
LMX1BO60663 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.76□□□□□ -1.65
LMX1BO60663 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.76□□□□□ -1.65
LMX1BO60663 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
LMX1BO60663 RPL35AP19-201ENST00000469425 329 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 AC004815.1-201ENST00000484185 331 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 AC093663.2-201ENST00000484625 313 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 OR2A3P-201ENST00000493774 953 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 AC112184.1-201ENST00000505179 312 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 AC147055.3-201ENST00000510547 851 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LMX1BO60663 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.76□□□□□ -1.65
LMX1BO60663 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.76□□□□□ -1.65
LMX1BO60663 HMGN1P9-201ENST00000515212 298 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 RN7SKP265-201ENST00000516448 223 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.76□□□□□ -1.65
LMX1BO60663 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.76□□□□□ -1.65
LMX1BO60663 UBTFL9-201ENST00000534504 1148 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.76□□□□□ -1.65
LMX1BO60663 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.76□□□□□ -1.65
LMX1BO60663 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.76□□□□□ -1.65
LMX1BO60663 LRRC34P1-201ENST00000542742 915 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 AP000619.2-201ENST00000546014 969 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.76□□□□□ -1.65
LMX1BO60663 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.76□□□□□ -1.65
LMX1BO60663 MTND2P17-201ENST00000550281 688 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 MTND3P12-201ENST00000559068 328 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.76□□□□□ -1.65
LMX1BO60663 AC090666.1-201ENST00000578241 445 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 RN7SL290P-201ENST00000578661 300 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
LMX1BO60663 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.76□□□□□ -1.65
LMX1BO60663 AC069431.2-201ENST00000604149 1099 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 AC025811.1-201ENST00000604312 472 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 AC010245.2-201ENST00000606908 1167 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 MIR8084-201ENST00000614105 89 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 RPSAP73-201ENST00000614820 330 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LMX1BO60663 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.76□□□□□ -1.65
LMX1BO60663 AC073869.8-201ENST00000641806 335 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMX1BO60663 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.76□□□□□ -1.65
LMX1BO60663 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
LMX1BO60663 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.76□□□□□ -1.65
LMX1BO60663 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMX1BO60663 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMX1BO60663 AC009501.3-201ENST00000605001 1352 ntBASIC4.76□□□□□ -1.65
LMX1BO60663 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.76□□□□□ -1.65
LMX1BO60663 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.76□□□□□ -1.65
LMX1BO60663 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LMX1BO60663 AC012078.1-201ENST00000405035 1646 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
LMX1BO60663 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LMX1BO60663 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LMX1BO60663 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.75□□□□□ -1.65
LMX1BO60663 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.75□□□□□ -1.65
LMX1BO60663 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms