Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.49□□□□□ -1.53
CLDN3O15551 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.49□□□□□ -1.53
CLDN3O15551 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.49□□□□□ -1.53
CLDN3O15551 MEMO1P5-201ENST00000604810 406 ntBASIC5.49□□□□□ -1.53
CLDN3O15551 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
CLDN3O15551 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CLDN3O15551 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CLDN3O15551 MTCO1P22-201ENST00000604619 1360 ntBASIC5.49□□□□□ -1.53
CLDN3O15551 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.49□□□□□ -1.53
CLDN3O15551 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CLDN3O15551 AC083843.2-201ENST00000568248 6253 ntBASIC5.49□□□□□ -1.53
CLDN3O15551 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN3O15551 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CLDN3O15551 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CLDN3O15551 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN3O15551 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLDN3O15551 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.48□□□□□ -1.53
CLDN3O15551 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CLDN3O15551 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CLDN3O15551 MAPK10-338ENST00000641647 3362 ntBASIC5.48□□□□□ -1.53
CLDN3O15551 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.48□□□□□ -1.53
CLDN3O15551 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
CLDN3O15551 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLDN3O15551 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLDN3O15551 AC019072.1-201ENST00000604535 1551 ntBASIC5.48□□□□□ -1.53
CLDN3O15551 ATP5HP3-201ENST00000396994 486 ntBASIC5.48□□□□□ -1.53
CLDN3O15551 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLDN3O15551 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
CLDN3O15551 AL109941.1-201ENST00000401925 229 ntBASIC5.48□□□□□ -1.53
CLDN3O15551 AP002530.1-201ENST00000405705 684 ntBASIC5.48□□□□□ -1.53
CLDN3O15551 SEPT7P8-201ENST00000413308 775 ntBASIC5.48□□□□□ -1.53
CLDN3O15551 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.48□□□□□ -1.53
CLDN3O15551 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.48□□□□□ -1.53
CLDN3O15551 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.48□□□□□ -1.53
CLDN3O15551 RPL12P18-201ENST00000437175 325 ntBASIC5.48□□□□□ -1.53
CLDN3O15551 RPS29P9-201ENST00000440360 171 ntBASIC5.48□□□□□ -1.53
CLDN3O15551 TRY2P-201ENST00000448860 689 ntBASIC5.48□□□□□ -1.53
CLDN3O15551 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.48□□□□□ -1.53
CLDN3O15551 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.48□□□□□ -1.53
CLDN3O15551 RN7SL826P-201ENST00000479724 288 ntBASIC5.48□□□□□ -1.53
CLDN3O15551 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.48□□□□□ -1.53
CLDN3O15551 AC012339.2-201ENST00000523996 453 ntBASIC5.48□□□□□ -1.53
CLDN3O15551 OR5AZ1P-201ENST00000527448 943 ntBASIC5.48□□□□□ -1.53
CLDN3O15551 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.48□□□□□ -1.53
CLDN3O15551 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.48□□□□□ -1.53
CLDN3O15551 AL512310.9-201ENST00000553311 948 ntBASIC5.48□□□□□ -1.53
CLDN3O15551 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.48□□□□□ -1.53
CLDN3O15551 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.48□□□□□ -1.53
CLDN3O15551 AP005901.4-201ENST00000577336 569 ntBASIC5.48□□□□□ -1.53
CLDN3O15551 MIR4443-201ENST00000585052 53 ntBASIC5.48□□□□□ -1.53
CLDN3O15551 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.48□□□□□ -1.53
CLDN3O15551 AC011487.3-201ENST00000593607 453 ntBASIC5.48□□□□□ -1.53
CLDN3O15551 AC112694.2-201ENST00000623697 768 ntBASIC5.48□□□□□ -1.53
CLDN3O15551 AL353662.3-201ENST00000625131 237 ntBASIC5.48□□□□□ -1.53
CLDN3O15551 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLDN3O15551 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.48□□□□□ -1.53
CLDN3O15551 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLDN3O15551 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLDN3O15551 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLDN3O15551 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.48□□□□□ -1.53
CLDN3O15551 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLDN3O15551 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.48□□□□□ -1.53
CLDN3O15551 INTS6P1-201ENST00000504674 2530 ntBASIC5.47□□□□□ -1.53
CLDN3O15551 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CLDN3O15551 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN3O15551 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CLDN3O15551 RN7SKP104-201ENST00000362605 328 ntBASIC5.47□□□□□ -1.53
CLDN3O15551 Y_RNA.62-201ENST00000362840 99 ntBASIC5.47□□□□□ -1.53
CLDN3O15551 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN3O15551 SNORA70.10-201ENST00000384515 134 ntBASIC5.47□□□□□ -1.53
CLDN3O15551 MIR137-201ENST00000385223 102 ntBASIC5.47□□□□□ -1.53
CLDN3O15551 AL021331.1-201ENST00000402817 582 ntBASIC5.47□□□□□ -1.53
CLDN3O15551 U3.32-201ENST00000408116 212 ntBASIC5.47□□□□□ -1.53
CLDN3O15551 RN7SKP125-201ENST00000410481 302 ntBASIC5.47□□□□□ -1.53
CLDN3O15551 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.47□□□□□ -1.53
CLDN3O15551 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN3O15551 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.47□□□□□ -1.53
CLDN3O15551 NPM1P22-201ENST00000427761 952 ntBASIC5.47□□□□□ -1.53
CLDN3O15551 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.47□□□□□ -1.53
CLDN3O15551 RPL12P3-201ENST00000440080 396 ntBASIC5.47□□□□□ -1.53
CLDN3O15551 TXNP5-201ENST00000441043 315 ntBASIC5.47□□□□□ -1.53
CLDN3O15551 RBMY2TP-201ENST00000451162 947 ntBASIC5.47□□□□□ -1.53
CLDN3O15551 RPL7P61-201ENST00000451721 751 ntBASIC5.47□□□□□ -1.53
CLDN3O15551 HMGB1P4-201ENST00000455362 567 ntBASIC5.47□□□□□ -1.53
CLDN3O15551 HNRNPRP2-201ENST00000528421 743 ntBASIC5.47□□□□□ -1.53
CLDN3O15551 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.47□□□□□ -1.53
CLDN3O15551 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.47□□□□□ -1.53
CLDN3O15551 EIF1P5-201ENST00000585002 234 ntBASIC5.47□□□□□ -1.53
CLDN3O15551 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.47□□□□□ -1.53
CLDN3O15551 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.47□□□□□ -1.53
CLDN3O15551 AC073575.2-201ENST00000614212 627 ntBASIC5.47□□□□□ -1.53
CLDN3O15551 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.47□□□□□ -1.53
CLDN3O15551 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.47□□□□□ -1.53
CLDN3O15551 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CLDN3O15551 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
CLDN3O15551 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.47□□□□□ -1.53
CLDN3O15551 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN3O15551 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN3O15551 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CLDN3O15551 OR9K1P-202ENST00000641111 3217 ntBASIC5.46□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms