Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 MIR323A-201ENST00000362199 86 ntBASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 RPS27P18-201ENST00000431701 247 ntBASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 Z80107.2-201ENST00000445127 392 ntBASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 AC097484.1-201ENST00000471148 389 ntBASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 RPL7P39-201ENST00000481157 744 ntBASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 RNA5SP43-201ENST00000516559 110 ntBASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 AC079075.1-201ENST00000559543 878 ntBASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 AC234782.5-201ENST00000617723 324 ntBASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 AC243960.7-201ENST00000623532 707 ntBASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 AC006453.5-201ENST00000636451 619 ntBASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 CASC19-264ENST00000641912 1184 ntBASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 MTCO1P7-201ENST00000419523 1542 ntBASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 AL445487.1-201ENST00000415694 1580 ntBASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 MAPK10-320ENST00000641462 6696 ntBASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM49D1C9J1S8 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 TBCAP2-201ENST00000416175 326 ntBASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 DDX39BP1-205ENST00000422507 192 ntBASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 CFL1P1-202ENST00000432948 411 ntBASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 OR52B5P-201ENST00000435337 951 ntBASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 SPRYD7P1-201ENST00000443861 570 ntBASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 RPL23AP37-201ENST00000479658 549 ntBASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 HMGN2P25-201ENST00000486956 268 ntBASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 COX6B1P5-201ENST00000509843 249 ntBASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 OR7E128P-201ENST00000532736 1024 ntBASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 TVP23CP2-201ENST00000571473 623 ntBASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 AC233702.9-201ENST00000581528 203 ntBASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 AP001542.1-201ENST00000591314 200 ntBASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 AL022401.1-201ENST00000619498 108 ntBASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 OR52B5P-202ENST00000641118 1110 ntBASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 NXF4-202ENST00000416098 1465 ntBASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 AC019072.1-201ENST00000604535 1551 ntBASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM49D1C9J1S8 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 RNA5SP345-201ENST00000410646 108 ntBASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 AF186996.5-201ENST00000418098 904 ntBASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 AL691447.1-201ENST00000419456 387 ntBASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 AC079355.1-201ENST00000421770 223 ntBASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 AC245047.2-201ENST00000441060 530 ntBASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 AC018638.3-201ENST00000461273 132 ntBASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 RN7SL97P-201ENST00000486780 299 ntBASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 RPS4XP18-201ENST00000495480 763 ntBASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 RN7SL558P-201ENST00000497468 299 ntBASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 AC011411.1-201ENST00000509592 876 ntBASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 BX510359.5-201ENST00000515651 304 ntBASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 AL049839.1-201ENST00000556151 657 ntBASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 AC105036.1-201ENST00000566222 271 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms