Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RPL7AP52-201ENST00000458096 790 ntBASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 RPL21P47-201ENST00000483696 477 ntBASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 AC113367.2-201ENST00000505749 160 ntBASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 RNU6-1046P-201ENST00000516538 107 ntBASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 AC084121.1-201ENST00000533882 835 ntBASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 AC008737.2-201ENST00000599446 118 ntBASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 AC009027.1-201ENST00000604510 479 ntBASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 AC005332.6-201ENST00000613178 446 ntBASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 AC012414.7-202ENST00000622705 1090 ntBASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 AP003486.1-201ENST00000525716 3994 ntBASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 AC005034.3-201ENST00000604845 1747 ntBASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 AL929601.4-201ENST00000613011 1341 ntBASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 Y_RNA.58-201ENST00000362807 102 ntBASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 Y_RNA.154-201ENST00000363624 102 ntBASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 RNA5SP435-201ENST00000364044 108 ntBASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 RNA5SP140-201ENST00000364524 92 ntBASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 RNA5SP512-201ENST00000364550 120 ntBASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 RNY3P1-201ENST00000365085 102 ntBASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 RNY3-201ENST00000365484 102 ntBASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 Y_RNA.459-201ENST00000384251 102 ntBASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 RNU6-196P-201ENST00000384315 107 ntBASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 Y_RNA.490-201ENST00000384413 102 ntBASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 IL6-206ENST00000407492 926 ntTSL 3 BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 ATP5A1P8-201ENST00000423669 1291 ntBASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 AC242426.1-201ENST00000435270 960 ntBASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 COL11A2P1-205ENST00000441798 676 ntBASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 SNRPBP1-201ENST00000443634 282 ntBASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 TAF8-207ENST00000482432 556 ntTSL 2 BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 RN7SL413P-201ENST00000482700 297 ntBASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 CREM-242ENST00000490511 469 ntTSL 2 BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 AC098799.3-201ENST00000506095 438 ntBASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 IGBP1P5-201ENST00000507524 1000 ntBASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 AC104108.1-201ENST00000509930 412 ntBASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 RGS4-207ENST00000527809 817 ntTSL 4 BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 AC007068.2-201ENST00000543168 395 ntBASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 AC006960.3-201ENST00000561845 705 ntBASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 AL035410.2-201ENST00000604963 864 ntBASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 AL133255.1-201ENST00000606374 441 ntBASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 AC107075.1-201ENST00000613695 314 ntBASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 MFSD8-245ENST00000641743 948 ntBASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC8.6□□□□□ -1.03
PDZRN3Q9UPQ7 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 AC096992.2-201ENST00000609553 1684 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 CREM-203ENST00000344351 1625 ntTSL 2 BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms