Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AL109809.4-201ENST00000603520 2185 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 SRP72P2-201ENST00000344851 1979 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 RN7SKP33-201ENST00000410942 340 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 SSR3-206ENST00000476217 807 ntTSL 3 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AL358832.1-201ENST00000497800 389 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AP001804.1-201ENST00000526868 919 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AC122688.1-201ENST00000541494 223 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AC079880.2-201ENST00000603790 1213 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AC005972.3-201ENST00000606304 481 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 AC022893.2-201ENST00000564832 3296 ntBASIC1.96□□□□□ -2.1
MACF1Q9UPN3 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
MACF1Q9UPN3 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 AC010329.5-201ENST00000623497 2174 ntBASIC1.95□□□□□ -2.1
MACF1Q9UPN3 PPFIA2-216ENST00000549396 5363 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 SOCS5P3-201ENST00000425115 1576 ntBASIC1.95□□□□□ -2.1
MACF1Q9UPN3 OR4A15-201ENST00000314706 1035 ntBASIC1.95□□□□□ -2.1
MACF1Q9UPN3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 RN7SL293P-201ENST00000481765 281 ntBASIC1.95□□□□□ -2.1
MACF1Q9UPN3 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.95□□□□□ -2.1
MACF1Q9UPN3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 TEK-202ENST00000406359 3935 ntTSL 2 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 RAD23BP3-201ENST00000454157 1152 ntBASIC1.95□□□□□ -2.1
MACF1Q9UPN3 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 AC090912.3-201ENST00000609775 533 ntBASIC1.95□□□□□ -2.1
MACF1Q9UPN3 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 COL6A4P1-202ENST00000487147 4317 ntBASIC1.95□□□□□ -2.1
MACF1Q9UPN3 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 CBX1P3-201ENST00000413296 527 ntBASIC1.95□□□□□ -2.1
MACF1Q9UPN3 SYF2P2-201ENST00000417620 583 ntBASIC1.95□□□□□ -2.1
MACF1Q9UPN3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 AC112503.1-201ENST00000608436 391 ntBASIC1.95□□□□□ -2.1
MACF1Q9UPN3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 AC011815.3-201ENST00000624194 473 ntBASIC1.95□□□□□ -2.1
MACF1Q9UPN3 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 DMXL2-201ENST00000251076 10672 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 ZNF285B-201ENST00000561698 1767 ntBASIC1.95□□□□□ -2.1
MACF1Q9UPN3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 AC079080.1-201ENST00000479841 822 ntBASIC1.95□□□□□ -2.1
MACF1Q9UPN3 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 AC137627.1-201ENST00000545761 289 ntBASIC1.95□□□□□ -2.1
MACF1Q9UPN3 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
MACF1Q9UPN3 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms