Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
TM9SF3Q9HD45 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.26□□□□□ -1.57
TM9SF3Q9HD45 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.26□□□□□ -1.57
TM9SF3Q9HD45 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
TM9SF3Q9HD45 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 SNURFL-201ENST00000309296 343 ntBASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 RN7SKP74-201ENST00000362849 309 ntBASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 SNORA56-201ENST00000383966 129 ntBASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 MIR600-201ENST00000385007 98 ntBASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 SNORA68.2-201ENST00000391263 128 ntBASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 DBIP1-201ENST00000401435 260 ntBASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 AL136131.1-201ENST00000406079 803 ntBASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 AC104837.2-201ENST00000427236 424 ntBASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 AL049745.1-201ENST00000433953 286 ntBASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 TAAR4P-201ENST00000454843 1039 ntBASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 AC058823.1-201ENST00000485315 474 ntBASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 AC108043.1-201ENST00000512696 574 ntBASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 AP002373.2-201ENST00000541631 1060 ntBASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 PCNPP1-201ENST00000552501 511 ntBASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 AC005252.1-201ENST00000604518 1063 ntBASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 EIF3FP1-201ENST00000613970 806 ntBASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
TM9SF3Q9HD45 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 THAP12P4-201ENST00000528321 2266 ntBASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 RNU1-74P-201ENST00000384108 171 ntBASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 AC010740.1-201ENST00000417035 684 ntBASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 AC073648.4-201ENST00000442655 781 ntBASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 RPS3AP53-201ENST00000454716 778 ntBASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 RN7SL809P-201ENST00000482040 297 ntBASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 AC007686.1-201ENST00000488511 463 ntBASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 AC021193.1-201ENST00000511607 420 ntBASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 AC005000.1-201ENST00000536192 288 ntBASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 CR383656.6-201ENST00000550518 394 ntBASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 AC005084.1-201ENST00000605160 304 ntBASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 AC093799.2-201ENST00000610062 578 ntBASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 AL359715.3-201ENST00000569267 2123 ntBASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 INTS6P1-201ENST00000504674 2530 ntBASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TM9SF3Q9HD45 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
TM9SF3Q9HD45 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TM9SF3Q9HD45 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms