Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC3.44□□□□□ -1.86
SND1-IT1Q9HBX3 AC145207.9-201ENST00000623802 325 ntBASIC3.44□□□□□ -1.86
SND1-IT1Q9HBX3 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC3.44□□□□□ -1.86
SND1-IT1Q9HBX3 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC3.44□□□□□ -1.86
SND1-IT1Q9HBX3 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.44□□□□□ -1.86
SND1-IT1Q9HBX3 5S_rRNA.28-201ENST00000638107 119 ntBASIC3.44□□□□□ -1.86
SND1-IT1Q9HBX3 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC3.44□□□□□ -1.86
SND1-IT1Q9HBX3 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SND1-IT1Q9HBX3 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SND1-IT1Q9HBX3 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SND1-IT1Q9HBX3 AC009313.2-201ENST00000417893 1941 ntBASIC3.44□□□□□ -1.86
SND1-IT1Q9HBX3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SND1-IT1Q9HBX3 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SND1-IT1Q9HBX3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SND1-IT1Q9HBX3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SND1-IT1Q9HBX3 YES1P1-201ENST00000418510 1628 ntBASIC3.44□□□□□ -1.86
SND1-IT1Q9HBX3 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
SND1-IT1Q9HBX3 AP000756.2-201ENST00000624168 2567 ntBASIC3.44□□□□□ -1.86
SND1-IT1Q9HBX3 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SND1-IT1Q9HBX3 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SND1-IT1Q9HBX3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SND1-IT1Q9HBX3 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SND1-IT1Q9HBX3 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SND1-IT1Q9HBX3 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
SND1-IT1Q9HBX3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 KARSP1-201ENST00000451871 1752 ntBASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 AC091305.2-201ENST00000624049 1576 ntBASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 ACTR3BP5-201ENST00000448440 1479 ntBASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 RN7SKP28-201ENST00000364770 305 ntBASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 SNORA16A-201ENST00000384342 137 ntBASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 RNA5SP487-201ENST00000410186 122 ntBASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 RPA2P2-201ENST00000419698 796 ntBASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 AC006065.1-201ENST00000422539 802 ntBASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 CLUHP1-201ENST00000435012 1190 ntBASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 TXNP2-201ENST00000443918 295 ntBASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 AP006222.1-205ENST00000450734 457 ntBASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 LRRC37A14P-201ENST00000452297 462 ntBASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 AL035090.1-201ENST00000454835 332 ntBASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 RPL7AP52-201ENST00000458096 790 ntBASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 EIF2S2P4-201ENST00000461070 984 ntBASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 ALG13-211ENST00000473389 693 ntTSL 2 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 AC073073.1-201ENST00000493920 463 ntBASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 RN7SL591P-201ENST00000496150 292 ntBASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 SNORA43.3-201ENST00000517240 103 ntBASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 BMPR1APS2-201ENST00000527904 1012 ntBASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 AC060766.1-201ENST00000590824 627 ntBASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 AC123786.2-201ENST00000603459 275 ntBASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 HMGB1P51-201ENST00000605166 638 ntBASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 AL391597.1-201ENST00000618707 694 ntBASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 TEX41-293ENST00000630451 690 ntTSL 5 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 SLC9B1P1-201ENST00000331172 1337 ntBASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SND1-IT1Q9HBX3 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SND1-IT1Q9HBX3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SND1-IT1Q9HBX3 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SND1-IT1Q9HBX3 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC3.42□□□□□ -1.86
SND1-IT1Q9HBX3 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SND1-IT1Q9HBX3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SND1-IT1Q9HBX3 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.42□□□□□ -1.86
SND1-IT1Q9HBX3 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms