Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC073111.2-201ENST00000605657 1075 ntBASIC5.6□□□□□ -1.51
EBF3Q9H4W6 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.6□□□□□ -1.51
EBF3Q9H4W6 AC133644.2-201ENST00000608142 540 ntBASIC5.6□□□□□ -1.51
EBF3Q9H4W6 AL356118.1-201ENST00000635272 1078 ntBASIC5.6□□□□□ -1.51
EBF3Q9H4W6 AL445984.1-201ENST00000637834 659 ntBASIC5.6□□□□□ -1.51
EBF3Q9H4W6 AL360270.2-201ENST00000562952 5985 ntBASIC5.6□□□□□ -1.51
EBF3Q9H4W6 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
EBF3Q9H4W6 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.6□□□□□ -1.51
EBF3Q9H4W6 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
EBF3Q9H4W6 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.6□□□□□ -1.51
EBF3Q9H4W6 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.6□□□□□ -1.51
EBF3Q9H4W6 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.6□□□□□ -1.51
EBF3Q9H4W6 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
EBF3Q9H4W6 OR55B1P-203ENST00000641518 2602 ntBASIC5.6□□□□□ -1.51
EBF3Q9H4W6 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 AC103591.2-201ENST00000265259 766 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 RNU6-386P-201ENST00000362650 107 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 RN7SKP74-201ENST00000362849 309 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 RNU1-136P-201ENST00000384181 164 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 MIR122-201ENST00000385044 85 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 AL133270.1-201ENST00000402635 279 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 RNU6-584P-201ENST00000410350 95 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 AJ239321.1-201ENST00000424255 564 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 CETN4P-201ENST00000432407 469 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 AL672138.1-201ENST00000450604 1015 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 AL122001.1-201ENST00000457027 370 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 ATP5LP5-201ENST00000483050 299 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 RN7SL97P-201ENST00000486780 299 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 AC117525.1-201ENST00000515228 503 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 AP004607.2-201ENST00000533949 322 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 OR8K4P-201ENST00000534608 872 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 AC027176.2-201ENST00000559166 746 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 AL109741.3-201ENST00000561748 592 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 AC009852.2-201ENST00000567898 485 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 AC005951.1-201ENST00000576706 485 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 RN7SL339P-201ENST00000580597 296 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 AL671309.1-201ENST00000603750 544 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 CR589904.2-201ENST00000612533 440 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 AL162574.1-201ENST00000615702 950 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 AC068620.4-201ENST00000636730 1182 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 MTND2P41-201ENST00000637599 773 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 AP000550.3-201ENST00000637734 379 ntBASIC5.59□□□□□ -1.51
EBF3Q9H4W6 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
EBF3Q9H4W6 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
EBF3Q9H4W6 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.52
EBF3Q9H4W6 AC012078.1-201ENST00000405035 1646 ntBASIC5.59□□□□□ -1.52
EBF3Q9H4W6 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.59□□□□□ -1.52
EBF3Q9H4W6 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.52
EBF3Q9H4W6 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.59□□□□□ -1.52
EBF3Q9H4W6 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
EBF3Q9H4W6 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
EBF3Q9H4W6 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.58□□□□□ -1.52
EBF3Q9H4W6 AL442128.2-201ENST00000620246 1824 ntBASIC5.58□□□□□ -1.52
EBF3Q9H4W6 SEPT7P7-201ENST00000420492 1301 ntBASIC5.58□□□□□ -1.52
EBF3Q9H4W6 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
EBF3Q9H4W6 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
EBF3Q9H4W6 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
EBF3Q9H4W6 RNA5SP305-201ENST00000362665 119 ntBASIC5.58□□□□□ -1.52
EBF3Q9H4W6 AL353692.2-201ENST00000407054 335 ntBASIC5.58□□□□□ -1.52
EBF3Q9H4W6 U3.36-201ENST00000408418 213 ntBASIC5.58□□□□□ -1.52
EBF3Q9H4W6 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.58□□□□□ -1.52
EBF3Q9H4W6 AC093655.2-201ENST00000425735 631 ntBASIC5.58□□□□□ -1.52
EBF3Q9H4W6 AC017019.1-201ENST00000426129 261 ntBASIC5.58□□□□□ -1.52
EBF3Q9H4W6 AC114973.1-201ENST00000429057 632 ntBASIC5.58□□□□□ -1.52
EBF3Q9H4W6 MTND4LP14-201ENST00000429447 288 ntBASIC5.58□□□□□ -1.52
EBF3Q9H4W6 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms