Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 AC008083.2-201ENST00000546707 476 ntBASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 CYCSP38-201ENST00000559840 322 ntBASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 AC095057.3-201ENST00000567102 1157 ntBASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 FAM27E4-201ENST00000605259 342 ntBASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 AC013468.1-201ENST00000608680 598 ntBASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 AC021755.4-201ENST00000616620 456 ntBASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 AC073593.1-201ENST00000624500 411 ntBASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 AC019226.2-201ENST00000625973 424 ntBASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 AL360270.2-201ENST00000562952 5985 ntBASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 AC007842.1-201ENST00000597336 2039 ntBASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 GTF2H2B-203ENST00000508065 1432 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 MIR133A2-201ENST00000347538 102 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 RN7SKP78-201ENST00000364711 318 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 RNU4-28P-201ENST00000364739 141 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 RNY3P9-201ENST00000384727 106 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 RNA5SP431-201ENST00000410312 120 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 RPS3AP37-201ENST00000419176 745 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 BX284632.2-201ENST00000421091 399 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 OR2X1P-201ENST00000421144 687 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AL512605.1-202ENST00000441919 381 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AL359955.2-201ENST00000445380 353 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 OR7E116P-201ENST00000448529 957 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 RPL12P39-201ENST00000455456 496 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 ACA64.1-201ENST00000459171 127 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 NAP1L1P3-201ENST00000462291 880 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 RN7SL168P-201ENST00000463821 279 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AC104687.1-201ENST00000485829 412 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 RN7SL193P-201ENST00000491708 276 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AC105384.2-201ENST00000508433 640 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AC021106.1-201ENST00000509020 1058 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AC074255.1-201ENST00000511259 501 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 RNA5SP340-201ENST00000517132 107 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AC079905.1-201ENST00000549280 475 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 MRPS36P5-201ENST00000551909 298 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AC091078.2-201ENST00000557145 559 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 CYP2C60P-201ENST00000566088 139 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 MIR6780B-201ENST00000610307 79 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AC015712.7-201ENST00000615211 635 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AC010975.3-201ENST00000618727 978 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms