Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 FGF7P2-201ENST00000332473 296 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 Y_RNA.408-201ENST00000383987 102 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 RNU6-259P-201ENST00000383999 107 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 RN7SKP221-201ENST00000410420 301 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 RNA5SP155-201ENST00000411154 129 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 AC013404.1-201ENST00000413068 249 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 AC245052.5-201ENST00000416320 649 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 AC092106.2-201ENST00000436597 487 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 PCNPP2-201ENST00000441651 455 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 HMGN1P32-201ENST00000441744 256 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 ANK3-207ENST00000460468 677 ntTSL 3 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 AC005165.2-201ENST00000466070 380 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 OR9A1P-202ENST00000484361 945 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 RN7SL267P-201ENST00000485107 261 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 RPL34P33-201ENST00000486062 334 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 RPL5P33-201ENST00000487833 905 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 CDH12P2-201ENST00000504393 298 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 AC091874.2-201ENST00000505889 720 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 AC114781.4-201ENST00000513707 639 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 RNU6-506P-201ENST00000516553 94 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 CA1-215ENST00000522389 551 ntTSL 3 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 AC083923.1-201ENST00000523708 376 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 AC073916.1-201ENST00000545095 130 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 AC112220.3-201ENST00000605502 502 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 AC090970.3-201ENST00000612566 866 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 HTR1DP1-201ENST00000616500 888 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 AC138932.5-201ENST00000617759 563 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 AC073869.7-201ENST00000640874 297 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 AC022034.1-201ENST00000512867 2156 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 AL137058.3-201ENST00000624531 3099 ntBASIC6.05□□□□□ -1.44
NUP43Q8NFH3 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP43Q8NFH3 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 AC109315.1-201ENST00000584143 1347 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 SMG1P5-202ENST00000529428 4219 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 SMG1P2-201ENST00000566127 4221 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 OR10J6P-201ENST00000289731 930 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 AC010894.1-201ENST00000313760 361 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 RNU6-114P-201ENST00000384704 105 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 SNORD65.1-201ENST00000390889 71 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 OR6C69P-201ENST00000394268 893 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 AL391419.1-201ENST00000398901 1275 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 AL034403.1-201ENST00000399414 885 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 PIGPP2-201ENST00000411569 458 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 RPL23AP39-201ENST00000415533 405 ntBASIC6.04□□□□□ -1.44
NUP43Q8NFH3 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.04□□□□□ -1.44
NUP43Q8NFH3 PTP4A1P1-201ENST00000420539 515 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms