Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC019050.1-201ENST00000418508 492 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 CENPIP1-201ENST00000425713 902 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 CYCSP42-201ENST00000450823 238 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 C1GALT1P3-201ENST00000522049 819 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC233699.1-201ENST00000569955 1168 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC099654.6-201ENST00000636487 512 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 SNORA70.4-201ENST00000365509 134 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 U3.22-201ENST00000391120 215 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 HSPA8P15-201ENST00000401676 786 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 NPM1P37-201ENST00000403105 874 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 RNU2-50P-201ENST00000410494 143 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC092570.3-201ENST00000420113 693 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 OR52J1P-201ENST00000450596 932 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC034236.1-201ENST00000469891 373 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 CR383656.1-201ENST00000484916 377 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 SOX5P1-201ENST00000524155 1127 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 OR5AN2P-201ENST00000534535 896 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AP001267.4-201ENST00000602598 545 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AL353729.2-201ENST00000605859 1249 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 LINC01355-201ENST00000566551 5444 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 DNAJC19P7-201ENST00000428811 344 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AL136455.1-201ENST00000441083 1240 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 TCEA1P1-201ENST00000449716 880 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 VDAC2P4-201ENST00000452925 711 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 RPL7AP52-201ENST00000458096 790 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC090058.1-201ENST00000498788 435 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 MORF4L1P3-201ENST00000525966 950 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC005000.1-201ENST00000536192 288 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AL356752.1-201ENST00000615844 593 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 CRIP1P1-201ENST00000427567 185 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 SCARNA22-201ENST00000503991 125 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 GAPDHP56-201ENST00000506031 988 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 IGBP1P5-201ENST00000507524 1000 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AP000889.1-201ENST00000530968 660 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AL049536.1-201ENST00000625043 744 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 RNA5SP453-201ENST00000362503 119 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 MIR1193-201ENST00000408109 78 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AL590399.2-201ENST00000427536 309 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC023271.1-201ENST00000445936 1090 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 NUTF2P7-201ENST00000453086 375 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 RPL7P40-201ENST00000481703 745 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 EDDM3DP-201ENST00000554692 434 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 STK3-216ENST00000523601 3107 ntTSL 2 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 NSF-206ENST00000575068 2667 ntTSL 2 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC093849.1-201ENST00000563631 2209 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC005261.6-201ENST00000623072 1387 ntBASIC1.53□□□□□ -2.16
SYNE1Q8NF91 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SYNE1Q8NF91 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SYNE1Q8NF91 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SYNE1Q8NF91 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC1.53□□□□□ -2.16
SYNE1Q8NF91 RPL21P108-201ENST00000413857 481 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms