Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC138832.1-201ENST00000522871 556 ntBASIC7.47□□□□□ -1.21
VPS8Q8N3P4 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC7.47□□□□□ -1.21
VPS8Q8N3P4 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC7.47□□□□□ -1.21
VPS8Q8N3P4 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
VPS8Q8N3P4 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC7.47□□□□□ -1.21
VPS8Q8N3P4 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
VPS8Q8N3P4 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
VPS8Q8N3P4 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
VPS8Q8N3P4 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
VPS8Q8N3P4 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
VPS8Q8N3P4 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
VPS8Q8N3P4 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
VPS8Q8N3P4 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
VPS8Q8N3P4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
VPS8Q8N3P4 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
VPS8Q8N3P4 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC7.46□□□□□ -1.21
VPS8Q8N3P4 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC7.46□□□□□ -1.21
VPS8Q8N3P4 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC7.46□□□□□ -1.21
VPS8Q8N3P4 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC7.46□□□□□ -1.21
VPS8Q8N3P4 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC7.46□□□□□ -1.21
VPS8Q8N3P4 RN7SL354P-201ENST00000469282 294 ntBASIC7.46□□□□□ -1.21
VPS8Q8N3P4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC7.46□□□□□ -1.21
VPS8Q8N3P4 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC7.46□□□□□ -1.21
VPS8Q8N3P4 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC7.46□□□□□ -1.21
VPS8Q8N3P4 AC092593.2-201ENST00000513866 913 ntBASIC7.46□□□□□ -1.21
VPS8Q8N3P4 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
VPS8Q8N3P4 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC7.46□□□□□ -1.21
VPS8Q8N3P4 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC7.46□□□□□ -1.21
VPS8Q8N3P4 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC7.46□□□□□ -1.21
VPS8Q8N3P4 AC068790.4-201ENST00000602474 263 ntBASIC7.46□□□□□ -1.21
VPS8Q8N3P4 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
VPS8Q8N3P4 DHX40P1-201ENST00000588725 1412 ntBASIC7.46□□□□□ -1.22
VPS8Q8N3P4 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
VPS8Q8N3P4 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC7.46□□□□□ -1.22
VPS8Q8N3P4 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
VPS8Q8N3P4 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
VPS8Q8N3P4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
VPS8Q8N3P4 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC7.46□□□□□ -1.22
VPS8Q8N3P4 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.22
VPS8Q8N3P4 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
VPS8Q8N3P4 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
VPS8Q8N3P4 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
VPS8Q8N3P4 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
VPS8Q8N3P4 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
VPS8Q8N3P4 AC119751.6-201ENST00000416712 186 ntBASIC7.45□□□□□ -1.22
VPS8Q8N3P4 AC140479.3-201ENST00000418944 1126 ntBASIC7.45□□□□□ -1.22
VPS8Q8N3P4 AC069213.2-201ENST00000420238 366 ntBASIC7.45□□□□□ -1.22
VPS8Q8N3P4 MRPS21P2-201ENST00000424704 264 ntBASIC7.45□□□□□ -1.22
VPS8Q8N3P4 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC7.45□□□□□ -1.22
VPS8Q8N3P4 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.45□□□□□ -1.22
VPS8Q8N3P4 MIR5096-201ENST00000583713 70 ntBASIC7.45□□□□□ -1.22
VPS8Q8N3P4 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC7.45□□□□□ -1.22
VPS8Q8N3P4 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.45□□□□□ -1.22
VPS8Q8N3P4 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
VPS8Q8N3P4 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
VPS8Q8N3P4 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.45□□□□□ -1.22
VPS8Q8N3P4 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC7.45□□□□□ -1.22
VPS8Q8N3P4 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC7.45□□□□□ -1.22
VPS8Q8N3P4 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
VPS8Q8N3P4 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC7.45□□□□□ -1.22
VPS8Q8N3P4 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC7.45□□□□□ -1.22
VPS8Q8N3P4 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
VPS8Q8N3P4 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC7.45□□□□□ -1.22
VPS8Q8N3P4 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC7.45□□□□□ -1.22
VPS8Q8N3P4 DPY19L2P2-203ENST00000435536 1858 ntBASIC7.45□□□□□ -1.22
VPS8Q8N3P4 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC7.45□□□□□ -1.22
VPS8Q8N3P4 MAPK10-328ENST00000641553 4009 ntBASIC7.45□□□□□ -1.22
VPS8Q8N3P4 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
VPS8Q8N3P4 RBPJP2-201ENST00000618187 1444 ntBASIC7.45□□□□□ -1.22
VPS8Q8N3P4 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 RNA5SP332-201ENST00000391063 115 ntBASIC7.44□□□□□ -1.22
VPS8Q8N3P4 RNU2-50P-201ENST00000410494 143 ntBASIC7.44□□□□□ -1.22
VPS8Q8N3P4 RN7SKP106-201ENST00000410832 272 ntBASIC7.44□□□□□ -1.22
VPS8Q8N3P4 AL591848.1-201ENST00000413092 322 ntBASIC7.44□□□□□ -1.22
VPS8Q8N3P4 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 EIF4HP2-201ENST00000424380 563 ntBASIC7.44□□□□□ -1.22
VPS8Q8N3P4 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 CREM-238ENST00000488741 651 ntTSL 2 BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 MGST2-204ENST00000506797 634 ntTSL 2 BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 IGHVIII-47-1-201ENST00000518187 331 ntBASIC7.44□□□□□ -1.22
VPS8Q8N3P4 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 MIR6810-201ENST00000622701 70 ntBASIC7.44□□□□□ -1.22
VPS8Q8N3P4 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 ARHGAP42P3-201ENST00000443989 2508 ntBASIC7.44□□□□□ -1.22
VPS8Q8N3P4 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 145 ms