Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RNA5SP428-201ENST00000365129 132 ntBASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 CHMP1B2P-201ENST00000399581 597 ntBASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 AL589647.1-201ENST00000402485 466 ntBASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 RN7SKP16-201ENST00000410180 299 ntBASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 NPM1P40-201ENST00000412758 733 ntBASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 RPL7AP61-201ENST00000443410 636 ntBASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 OR7E125P-201ENST00000443450 846 ntBASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 RN7SL441P-201ENST00000492388 296 ntBASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 AGGF1P3-201ENST00000493675 1213 ntBASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 AC012339.2-201ENST00000523996 453 ntBASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 MEMO1P5-201ENST00000604810 406 ntBASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 AC018695.5-201ENST00000605872 315 ntBASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 AC020658.4-201ENST00000613987 684 ntBASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 AC090510.2-201ENST00000617465 629 ntBASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 CR382285.2-201ENST00000624662 1495 ntBASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 AC025574.1-201ENST00000554784 1653 ntBASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
C9orf40Q8IXQ3 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 AC007996.1-201ENST00000620414 2821 ntBASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 RNU6-1331P-201ENST00000363658 106 ntBASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 AC007068.1-201ENST00000396690 844 ntBASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 ATP5HP3-201ENST00000396994 486 ntBASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 AL109941.1-201ENST00000401925 229 ntBASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 RPL21P67-201ENST00000402896 478 ntBASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 CTSL3P-202ENST00000412179 788 ntBASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 PCNPP4-201ENST00000414817 517 ntBASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 AC004980.3-201ENST00000447046 365 ntBASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 AC008410.1-201ENST00000483777 339 ntBASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 AL049874.2-201ENST00000492636 288 ntBASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 RN7SL244P-201ENST00000493405 297 ntBASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 NDUFA5P12-201ENST00000503796 343 ntBASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 AL512310.9-201ENST00000553311 948 ntBASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 SETP1-201ENST00000556014 845 ntBASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 NDUFB4P11-201ENST00000560510 395 ntBASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 EIF1P5-201ENST00000585002 234 ntBASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 EIF3FP1-201ENST00000613970 806 ntBASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 CASC19-222ENST00000641321 1173 ntBASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
C9orf40Q8IXQ3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms