Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 NAMPTP1-201ENST00000440465 2514 ntBASIC4.48□□□□□ -1.69
CCDC58Q4VC31 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 AC074029.4-201ENST00000624796 1859 ntBASIC4.48□□□□□ -1.69
CCDC58Q4VC31 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 RNU6-984P-201ENST00000363236 109 ntBASIC4.48□□□□□ -1.69
CCDC58Q4VC31 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 SLC20A1P1-201ENST00000413906 956 ntBASIC4.48□□□□□ -1.69
CCDC58Q4VC31 SDHDP6-201ENST00000414693 480 ntBASIC4.48□□□□□ -1.69
CCDC58Q4VC31 RANP7-201ENST00000418085 644 ntBASIC4.48□□□□□ -1.69
CCDC58Q4VC31 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 AC069285.2-201ENST00000440210 275 ntBASIC4.48□□□□□ -1.69
CCDC58Q4VC31 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 AL162388.1-201ENST00000450912 352 ntBASIC4.48□□□□□ -1.69
CCDC58Q4VC31 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 AL133445.1-201ENST00000467051 452 ntBASIC4.48□□□□□ -1.69
CCDC58Q4VC31 CCDC75P1-201ENST00000469247 791 ntBASIC4.48□□□□□ -1.69
CCDC58Q4VC31 RPL7P6-201ENST00000480903 738 ntBASIC4.48□□□□□ -1.69
CCDC58Q4VC31 EIF1P7-201ENST00000487533 337 ntBASIC4.48□□□□□ -1.69
CCDC58Q4VC31 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 VWA8P1-201ENST00000510889 176 ntBASIC4.48□□□□□ -1.69
CCDC58Q4VC31 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 AC007066.2-202ENST00000566531 914 ntBASIC4.48□□□□□ -1.69
CCDC58Q4VC31 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 MIR1273E-201ENST00000581165 102 ntBASIC4.48□□□□□ -1.69
CCDC58Q4VC31 MIR4505-201ENST00000582238 73 ntBASIC4.48□□□□□ -1.69
CCDC58Q4VC31 AL138895.2-201ENST00000603019 178 ntBASIC4.48□□□□□ -1.69
CCDC58Q4VC31 AC010245.2-201ENST00000606908 1167 ntBASIC4.48□□□□□ -1.69
CCDC58Q4VC31 AC091979.2-201ENST00000607514 214 ntBASIC4.48□□□□□ -1.69
CCDC58Q4VC31 AC073593.1-201ENST00000624500 411 ntBASIC4.48□□□□□ -1.69
CCDC58Q4VC31 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 AC017104.4-201ENST00000636283 1592 ntBASIC4.48□□□□□ -1.69
CCDC58Q4VC31 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 AC107068.1-201ENST00000563286 4218 ntBASIC4.48□□□□□ -1.69
CCDC58Q4VC31 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC58Q4VC31 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC58Q4VC31 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
CCDC58Q4VC31 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC58Q4VC31 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.47□□□□□ -1.69
CCDC58Q4VC31 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
CCDC58Q4VC31 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC58Q4VC31 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CCDC58Q4VC31 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CCDC58Q4VC31 GCNT6-201ENST00000379591 934 ntBASIC4.47□□□□□ -1.69
CCDC58Q4VC31 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC58Q4VC31 GABARAPL3-201ENST00000412799 354 ntBASIC4.47□□□□□ -1.69
CCDC58Q4VC31 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC58Q4VC31 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC58Q4VC31 AC093655.2-201ENST00000425735 631 ntBASIC4.47□□□□□ -1.69
CCDC58Q4VC31 RPS4XP16-201ENST00000427198 791 ntBASIC4.47□□□□□ -1.69
CCDC58Q4VC31 NMNAT1P2-201ENST00000435192 860 ntBASIC4.47□□□□□ -1.69
CCDC58Q4VC31 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC58Q4VC31 PCNPP2-201ENST00000441651 455 ntBASIC4.47□□□□□ -1.69
CCDC58Q4VC31 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC58Q4VC31 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC58Q4VC31 RN7SL443P-201ENST00000464331 290 ntBASIC4.47□□□□□ -1.69
CCDC58Q4VC31 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC58Q4VC31 PGBD4P4-201ENST00000509673 613 ntBASIC4.47□□□□□ -1.69
CCDC58Q4VC31 AC006499.4-201ENST00000510947 694 ntBASIC4.47□□□□□ -1.69
CCDC58Q4VC31 RNA5SP228-201ENST00000516232 133 ntBASIC4.47□□□□□ -1.69
CCDC58Q4VC31 MYL12AP1-201ENST00000518490 515 ntBASIC4.47□□□□□ -1.69
CCDC58Q4VC31 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC58Q4VC31 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC58Q4VC31 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC58Q4VC31 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC58Q4VC31 AC026979.4-201ENST00000606555 645 ntBASIC4.47□□□□□ -1.69
CCDC58Q4VC31 AP005432.2-201ENST00000608162 586 ntBASIC4.47□□□□□ -1.69
CCDC58Q4VC31 MIR7109-201ENST00000613748 65 ntBASIC4.47□□□□□ -1.69
CCDC58Q4VC31 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms