Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RPL21P110-201ENST00000433345 446 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 RPL14P5-201ENST00000436474 730 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDH1Q08174 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDH1Q08174 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.62□□□□□ -1.35
PCDH1Q08174 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC6.62□□□□□ -1.35
PCDH1Q08174 RPS4XP19-201ENST00000460237 736 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDH1Q08174 AP002884.1-201ENST00000479691 655 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDH1Q08174 DUTP7-201ENST00000507982 486 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDH1Q08174 RPL7L1P13-201ENST00000511702 739 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDH1Q08174 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 RNA5SP116-201ENST00000516132 98 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 RNA5SP318-201ENST00000516352 92 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDH1Q08174 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDH1Q08174 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC6.62□□□□□ -1.35
PCDH1Q08174 AC107952.1-201ENST00000524200 376 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 AP001189.2-201ENST00000527320 189 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDH1Q08174 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.62□□□□□ -1.35
PCDH1Q08174 OR6C73P-201ENST00000546432 358 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.62□□□□□ -1.35
PCDH1Q08174 AC023080.1-201ENST00000551663 931 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.62□□□□□ -1.35
PCDH1Q08174 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
PCDH1Q08174 AC091489.2-201ENST00000566263 604 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 MIR3913-1-201ENST00000577744 102 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 AC011193.2-201ENST00000582638 367 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDH1Q08174 KPNA2P3-201ENST00000584190 848 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 AC090241.1-201ENST00000587732 621 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDH1Q08174 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDH1Q08174 DUXAP4-201ENST00000603046 613 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDH1Q08174 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDH1Q08174 AC064836.2-201ENST00000609491 462 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 AC131902.3-201ENST00000611767 581 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDH1Q08174 OR8G7P-201ENST00000616658 848 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 AC092650.2-201ENST00000619984 902 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 AC079228.1-201ENST00000624774 1049 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDH1Q08174 MIR665-201ENST00000635949 72 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDH1Q08174 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDH1Q08174 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
PCDH1Q08174 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.62□□□□□ -1.35
PCDH1Q08174 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.62□□□□□ -1.35
PCDH1Q08174 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDH1Q08174 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDH1Q08174 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
PCDH1Q08174 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDH1Q08174 AC005034.3-201ENST00000604845 1747 ntBASIC6.62□□□□□ -1.35
PCDH1Q08174 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.61□□□□□ -1.35
PCDH1Q08174 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDH1Q08174 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDH1Q08174 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
PCDH1Q08174 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.61□□□□□ -1.35
PCDH1Q08174 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.61□□□□□ -1.35
PCDH1Q08174 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDH1Q08174 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDH1Q08174 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDH1Q08174 RNA5SP302-201ENST00000364896 100 ntBASIC6.61□□□□□ -1.35
PCDH1Q08174 RNU5E-5P-201ENST00000365379 116 ntBASIC6.61□□□□□ -1.35
PCDH1Q08174 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
PCDH1Q08174 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDH1Q08174 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
PCDH1Q08174 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.61□□□□□ -1.35
PCDH1Q08174 ARL4AP5-201ENST00000404372 599 ntBASIC6.61□□□□□ -1.35
PCDH1Q08174 AL662791.3-201ENST00000413771 776 ntBASIC6.61□□□□□ -1.35
PCDH1Q08174 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDH1Q08174 AL138479.1-201ENST00000426913 484 ntBASIC6.61□□□□□ -1.35
PCDH1Q08174 AC009362.1-201ENST00000427253 406 ntBASIC6.61□□□□□ -1.35
PCDH1Q08174 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDH1Q08174 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDH1Q08174 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC6.61□□□□□ -1.35
PCDH1Q08174 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDH1Q08174 AC239800.1-201ENST00000442049 719 ntBASIC6.61□□□□□ -1.35
PCDH1Q08174 ANKRD30BP3-201ENST00000444850 1070 ntBASIC6.61□□□□□ -1.35
PCDH1Q08174 RPL31P44-201ENST00000447680 377 ntBASIC6.61□□□□□ -1.35
PCDH1Q08174 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDH1Q08174 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC6.61□□□□□ -1.35
PCDH1Q08174 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.61□□□□□ -1.35
PCDH1Q08174 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDH1Q08174 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.61□□□□□ -1.35
PCDH1Q08174 TRBV8-2-201ENST00000475637 270 ntBASIC6.61□□□□□ -1.35
PCDH1Q08174 AC108078.3-201ENST00000502633 489 ntBASIC6.61□□□□□ -1.35
PCDH1Q08174 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDH1Q08174 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDH1Q08174 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC6.61□□□□□ -1.35
PCDH1Q08174 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.61□□□□□ -1.35
PCDH1Q08174 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.61□□□□□ -1.35
PCDH1Q08174 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms