Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RPL7P56-201ENST00000429441 717 ntBASIC5.3□□□□□ -1.56
RAE1P78406 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.3□□□□□ -1.56
RAE1P78406 SETP8-201ENST00000435341 628 ntBASIC5.3□□□□□ -1.56
RAE1P78406 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.3□□□□□ -1.56
RAE1P78406 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.3□□□□□ -1.56
RAE1P78406 AL359265.1-201ENST00000440296 795 ntBASIC5.3□□□□□ -1.56
RAE1P78406 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.3□□□□□ -1.56
RAE1P78406 AC092685.1-201ENST00000447960 1243 ntBASIC5.3□□□□□ -1.56
RAE1P78406 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.3□□□□□ -1.56
RAE1P78406 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.3□□□□□ -1.56
RAE1P78406 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RAE1P78406 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.3□□□□□ -1.56
RAE1P78406 PSMC1P13-201ENST00000458195 985 ntBASIC5.3□□□□□ -1.56
RAE1P78406 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.3□□□□□ -1.56
RAE1P78406 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.3□□□□□ -1.56
RAE1P78406 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.3□□□□□ -1.56
RAE1P78406 AC097486.1-201ENST00000515331 210 ntBASIC5.3□□□□□ -1.56
RAE1P78406 RNA5SP303-201ENST00000516192 130 ntBASIC5.3□□□□□ -1.56
RAE1P78406 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.3□□□□□ -1.56
RAE1P78406 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RAE1P78406 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.3□□□□□ -1.56
RAE1P78406 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.3□□□□□ -1.56
RAE1P78406 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.3□□□□□ -1.56
RAE1P78406 AC008536.1-201ENST00000602872 669 ntBASIC5.3□□□□□ -1.56
RAE1P78406 DUXAP3-201ENST00000603616 594 ntBASIC5.3□□□□□ -1.56
RAE1P78406 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.3□□□□□ -1.56
RAE1P78406 AL031658.2-201ENST00000616850 651 ntBASIC5.3□□□□□ -1.56
RAE1P78406 AC009120.7-201ENST00000623452 780 ntBASIC5.3□□□□□ -1.56
RAE1P78406 AL390318.1-201ENST00000624564 687 ntBASIC5.3□□□□□ -1.56
RAE1P78406 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.3□□□□□ -1.56
RAE1P78406 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.3□□□□□ -1.56
RAE1P78406 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.3□□□□□ -1.56
RAE1P78406 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.3□□□□□ -1.56
RAE1P78406 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
RAE1P78406 AC109446.4-201ENST00000623235 2755 ntBASIC5.3□□□□□ -1.56
RAE1P78406 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RAE1P78406 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RAE1P78406 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RAE1P78406 AC079097.1-201ENST00000512187 1399 ntBASIC5.29□□□□□ -1.56
RAE1P78406 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RAE1P78406 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RAE1P78406 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.29□□□□□ -1.56
RAE1P78406 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RAE1P78406 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.29□□□□□ -1.56
RAE1P78406 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RAE1P78406 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RAE1P78406 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
RAE1P78406 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
RAE1P78406 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.29□□□□□ -1.56
RAE1P78406 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
RAE1P78406 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RAE1P78406 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RAE1P78406 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
RAE1P78406 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RAE1P78406 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RAE1P78406 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RAE1P78406 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RAE1P78406 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RAE1P78406 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RAE1P78406 RNU6-1263P-201ENST00000384601 106 ntBASIC5.29□□□□□ -1.56
RAE1P78406 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RAE1P78406 RPS3AP2-201ENST00000407190 754 ntBASIC5.29□□□□□ -1.56
RAE1P78406 HMGB3P31-201ENST00000413333 595 ntBASIC5.29□□□□□ -1.56
RAE1P78406 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.29□□□□□ -1.56
RAE1P78406 MTND4P3-201ENST00000417829 541 ntBASIC5.29□□□□□ -1.56
RAE1P78406 KRR1P1-201ENST00000419430 803 ntBASIC5.29□□□□□ -1.56
RAE1P78406 NME1P1-201ENST00000420914 382 ntBASIC5.29□□□□□ -1.56
RAE1P78406 RPL24P2-201ENST00000421023 475 ntBASIC5.29□□□□□ -1.56
RAE1P78406 AL354766.1-201ENST00000423396 542 ntBASIC5.29□□□□□ -1.56
RAE1P78406 RPS27AP6-201ENST00000427962 448 ntBASIC5.29□□□□□ -1.56
RAE1P78406 GAPDHP34-201ENST00000432112 823 ntBASIC5.29□□□□□ -1.56
RAE1P78406 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.29□□□□□ -1.56
RAE1P78406 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.29□□□□□ -1.56
RAE1P78406 LDHAP2-201ENST00000437325 985 ntBASIC5.29□□□□□ -1.56
RAE1P78406 PTGES3P1-201ENST00000439531 483 ntBASIC5.29□□□□□ -1.56
RAE1P78406 YWHAZP2-201ENST00000440317 728 ntBASIC5.29□□□□□ -1.56
RAE1P78406 AC073465.2-201ENST00000440938 498 ntBASIC5.29□□□□□ -1.56
RAE1P78406 HMGN1P2-201ENST00000445197 310 ntBASIC5.29□□□□□ -1.56
RAE1P78406 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.29□□□□□ -1.56
RAE1P78406 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.29□□□□□ -1.56
RAE1P78406 RPL7P45-201ENST00000455851 743 ntBASIC5.29□□□□□ -1.56
RAE1P78406 RN7SL188P-201ENST00000469842 285 ntBASIC5.29□□□□□ -1.56
RAE1P78406 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RAE1P78406 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.29□□□□□ -1.56
RAE1P78406 RPSAP51-201ENST00000497462 645 ntBASIC5.29□□□□□ -1.56
RAE1P78406 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.29□□□□□ -1.56
RAE1P78406 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RAE1P78406 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
RAE1P78406 AC091912.1-201ENST00000511351 248 ntBASIC5.29□□□□□ -1.56
RAE1P78406 RNU6-615P-201ENST00000516065 106 ntBASIC5.29□□□□□ -1.56
RAE1P78406 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.29□□□□□ -1.56
RAE1P78406 HIGD1AP18-201ENST00000520730 278 ntBASIC5.29□□□□□ -1.56
RAE1P78406 NDUFS5P6-201ENST00000529136 295 ntBASIC5.29□□□□□ -1.56
RAE1P78406 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.29□□□□□ -1.56
RAE1P78406 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.29□□□□□ -1.56
RAE1P78406 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.29□□□□□ -1.56
RAE1P78406 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.29□□□□□ -1.56
RAE1P78406 AC004223.2-201ENST00000590309 544 ntBASIC5.29□□□□□ -1.56
RAE1P78406 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.29□□□□□ -1.56
RAE1P78406 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms