Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 RPL12P34-201ENST00000424532 479 ntBASIC3.63□□□□□ -1.83
CKS1BP61024 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC3.63□□□□□ -1.83
CKS1BP61024 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.63□□□□□ -1.83
CKS1BP61024 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CKS1BP61024 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC3.63□□□□□ -1.83
CKS1BP61024 AL138787.1-202ENST00000437804 898 ntBASIC3.63□□□□□ -1.83
CKS1BP61024 CASP3P1-201ENST00000446037 609 ntBASIC3.63□□□□□ -1.83
CKS1BP61024 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC3.63□□□□□ -1.83
CKS1BP61024 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.63□□□□□ -1.83
CKS1BP61024 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC3.63□□□□□ -1.83
CKS1BP61024 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC3.63□□□□□ -1.83
CKS1BP61024 RPS12P31-201ENST00000491419 398 ntBASIC3.63□□□□□ -1.83
CKS1BP61024 DEFB109F-201ENST00000491870 277 ntBASIC3.63□□□□□ -1.83
CKS1BP61024 RN7SL568P-201ENST00000493069 298 ntBASIC3.63□□□□□ -1.83
CKS1BP61024 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CKS1BP61024 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC3.63□□□□□ -1.83
CKS1BP61024 RPEP1-201ENST00000504507 658 ntBASIC3.63□□□□□ -1.83
CKS1BP61024 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CKS1BP61024 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC3.63□□□□□ -1.83
CKS1BP61024 LDHAP1-201ENST00000509421 992 ntBASIC3.63□□□□□ -1.83
CKS1BP61024 SNORA70.20-201ENST00000516848 126 ntBASIC3.63□□□□□ -1.83
CKS1BP61024 IGLV3-30-201ENST00000524362 298 ntBASIC3.63□□□□□ -1.83
CKS1BP61024 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC3.63□□□□□ -1.83
CKS1BP61024 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CKS1BP61024 DCN-210ENST00000547568 823 ntTSL 3 BASIC3.63□□□□□ -1.83
CKS1BP61024 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC3.63□□□□□ -1.83
CKS1BP61024 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.63□□□□□ -1.83
CKS1BP61024 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC3.63□□□□□ -1.83
CKS1BP61024 AP005403.1-201ENST00000579720 229 ntBASIC3.63□□□□□ -1.83
CKS1BP61024 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC3.63□□□□□ -1.83
CKS1BP61024 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC3.63□□□□□ -1.83
CKS1BP61024 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC3.63□□□□□ -1.83
CKS1BP61024 TEX41-218ENST00000596540 882 ntTSL 5 BASIC3.63□□□□□ -1.83
CKS1BP61024 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.63□□□□□ -1.83
CKS1BP61024 AC005479.3-201ENST00000602790 431 ntBASIC3.63□□□□□ -1.83
CKS1BP61024 XIST-210ENST00000602863 775 ntTSL 3 BASIC3.63□□□□□ -1.83
CKS1BP61024 AC005899.6-201ENST00000620729 297 ntBASIC3.63□□□□□ -1.83
CKS1BP61024 AC016542.2-201ENST00000624201 619 ntBASIC3.63□□□□□ -1.83
CKS1BP61024 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.63□□□□□ -1.83
CKS1BP61024 MARK2P15-201ENST00000432204 2186 ntBASIC3.63□□□□□ -1.83
CKS1BP61024 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CKS1BP61024 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CKS1BP61024 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CKS1BP61024 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CKS1BP61024 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CKS1BP61024 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC3.63□□□□□ -1.83
CKS1BP61024 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CKS1BP61024 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CKS1BP61024 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CKS1BP61024 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CKS1BP61024 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC3.62□□□□□ -1.83
CKS1BP61024 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CKS1BP61024 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CKS1BP61024 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CKS1BP61024 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CKS1BP61024 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CKS1BP61024 HSPA8P15-201ENST00000401676 786 ntBASIC3.62□□□□□ -1.83
CKS1BP61024 MIR1183-201ENST00000408856 89 ntBASIC3.62□□□□□ -1.83
CKS1BP61024 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.62□□□□□ -1.83
CKS1BP61024 AL035660.1-201ENST00000422041 222 ntBASIC3.62□□□□□ -1.83
CKS1BP61024 AC007161.1-204ENST00000423039 460 ntBASIC3.62□□□□□ -1.83
CKS1BP61024 RPL7P28-201ENST00000437739 740 ntBASIC3.62□□□□□ -1.83
CKS1BP61024 AL391987.1-201ENST00000441025 200 ntBASIC3.62□□□□□ -1.83
CKS1BP61024 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC3.62□□□□□ -1.83
CKS1BP61024 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC3.62□□□□□ -1.83
CKS1BP61024 CST12P-201ENST00000457644 362 ntBASIC3.62□□□□□ -1.83
CKS1BP61024 RPSAP37-201ENST00000470913 821 ntBASIC3.62□□□□□ -1.83
CKS1BP61024 AC092754.1-201ENST00000472975 479 ntBASIC3.62□□□□□ -1.83
CKS1BP61024 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC3.62□□□□□ -1.83
CKS1BP61024 RPS3AP15-201ENST00000483874 781 ntBASIC3.62□□□□□ -1.83
CKS1BP61024 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.62□□□□□ -1.83
CKS1BP61024 AC122718.2-201ENST00000505325 591 ntBASIC3.62□□□□□ -1.83
CKS1BP61024 AC091874.2-201ENST00000505889 720 ntBASIC3.62□□□□□ -1.83
CKS1BP61024 EIF3KP3-201ENST00000514461 639 ntBASIC3.62□□□□□ -1.83
CKS1BP61024 SCARNA16.4-201ENST00000516956 187 ntBASIC3.62□□□□□ -1.83
CKS1BP61024 SCARNA20.4-201ENST00000516969 131 ntBASIC3.62□□□□□ -1.83
CKS1BP61024 RNA5SP340-201ENST00000517132 107 ntBASIC3.62□□□□□ -1.83
CKS1BP61024 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.62□□□□□ -1.83
CKS1BP61024 TBCA-207ENST00000520039 157 ntTSL 3 BASIC3.62□□□□□ -1.83
CKS1BP61024 CASP1P2-201ENST00000526830 1258 ntBASIC3.62□□□□□ -1.83
CKS1BP61024 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC3.62□□□□□ -1.83
CKS1BP61024 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC3.62□□□□□ -1.83
CKS1BP61024 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.62□□□□□ -1.83
CKS1BP61024 GSTP1P1-201ENST00000548078 319 ntBASIC3.62□□□□□ -1.83
CKS1BP61024 CBX3P5-201ENST00000552017 521 ntBASIC3.62□□□□□ -1.83
CKS1BP61024 AL845552.1-201ENST00000556820 323 ntBASIC3.62□□□□□ -1.83
CKS1BP61024 AC007066.2-202ENST00000566531 914 ntBASIC3.62□□□□□ -1.83
CKS1BP61024 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC3.62□□□□□ -1.83
CKS1BP61024 GMFG-202ENST00000594700 397 ntTSL 2 BASIC3.62□□□□□ -1.83
CKS1BP61024 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC3.62□□□□□ -1.83
CKS1BP61024 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC3.62□□□□□ -1.83
CKS1BP61024 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CKS1BP61024 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CKS1BP61024 AP005431.1-201ENST00000618479 319 ntBASIC3.62□□□□□ -1.83
CKS1BP61024 AC022919.1-201ENST00000624979 626 ntBASIC3.62□□□□□ -1.83
CKS1BP61024 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CKS1BP61024 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CKS1BP61024 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CKS1BP61024 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CKS1BP61024 AC108751.5-201ENST00000492880 1336 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms