Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AL136131.3-201ENST00000607600 188 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC6.38□□□□□ -1.39
EPHB3P54753 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.38□□□□□ -1.39
EPHB3P54753 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.38□□□□□ -1.39
EPHB3P54753 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.38□□□□□ -1.39
EPHB3P54753 CASC19-264ENST00000641912 1184 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.38□□□□□ -1.39
EPHB3P54753 AC119674.1-213ENST00000641177 1386 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 AL133268.1-201ENST00000405676 1401 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.38□□□□□ -1.39
EPHB3P54753 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.38□□□□□ -1.39
EPHB3P54753 NCLP2-201ENST00000416078 1462 ntBASIC6.38□□□□□ -1.39
EPHB3P54753 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
EPHB3P54753 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.38□□□□□ -1.39
EPHB3P54753 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
EPHB3P54753 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.38□□□□□ -1.39
EPHB3P54753 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
EPHB3P54753 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
EPHB3P54753 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
EPHB3P54753 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
EPHB3P54753 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
EPHB3P54753 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
EPHB3P54753 AC119674.1-202ENST00000641333 1860 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.37□□□□□ -1.39
EPHB3P54753 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
EPHB3P54753 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.37□□□□□ -1.39
EPHB3P54753 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
EPHB3P54753 HSPD1P11-201ENST00000508643 1702 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 CDY11P-201ENST00000447168 1651 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
EPHB3P54753 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
EPHB3P54753 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.37□□□□□ -1.39
EPHB3P54753 HDAC1P2-201ENST00000453661 1398 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
EPHB3P54753 TMSB4XP4-201ENST00000323496 618 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 UBE2Q2P1-202ENST00000354771 883 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 SNORD56.4-201ENST00000363883 71 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
EPHB3P54753 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
EPHB3P54753 AL512422.1-201ENST00000407033 553 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 SNRPEP6-201ENST00000407465 277 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 RNA5SP178-201ENST00000410380 128 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 MTCO1P17-201ENST00000411522 491 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC6.37□□□□□ -1.39
EPHB3P54753 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.37□□□□□ -1.39
EPHB3P54753 AL513325.1-201ENST00000417716 1034 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 EIF4A1P1-201ENST00000420241 934 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 EIF1P1-201ENST00000421436 341 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 AL139415.2-201ENST00000431968 163 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 AL451136.1-201ENST00000435399 325 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 PCBP2P1-201ENST00000437262 977 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.37□□□□□ -1.39
EPHB3P54753 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.37□□□□□ -1.39
EPHB3P54753 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.37□□□□□ -1.39
EPHB3P54753 AC068724.1-201ENST00000487100 792 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC6.37□□□□□ -1.39
EPHB3P54753 AC092045.1-201ENST00000495716 1231 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
EPHB3P54753 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.37□□□□□ -1.39
EPHB3P54753 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC6.37□□□□□ -1.39
EPHB3P54753 AC106872.4-201ENST00000510050 523 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.37□□□□□ -1.39
EPHB3P54753 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
EPHB3P54753 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.37□□□□□ -1.39
EPHB3P54753 AC104417.1-201ENST00000523974 751 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 ADI1P3-201ENST00000549509 470 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC6.37□□□□□ -1.39
EPHB3P54753 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.37□□□□□ -1.39
EPHB3P54753 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC6.37□□□□□ -1.39
EPHB3P54753 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.37□□□□□ -1.39
EPHB3P54753 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.37□□□□□ -1.39
EPHB3P54753 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.37□□□□□ -1.39
EPHB3P54753 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.37□□□□□ -1.39
EPHB3P54753 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.37□□□□□ -1.39
EPHB3P54753 AC126118.1-201ENST00000607744 628 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 AC016769.4-201ENST00000616893 535 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 TCL6_3.1-201ENST00000619064 137 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.37□□□□□ -1.39
EPHB3P54753 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.37□□□□□ -1.39
EPHB3P54753 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.37□□□□□ -1.39
EPHB3P54753 AC116667.2-201ENST00000641075 823 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.37□□□□□ -1.39
EPHB3P54753 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
EPHB3P54753 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
EPHB3P54753 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
EPHB3P54753 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
EPHB3P54753 AL022323.4-201ENST00000623980 13120 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
EPHB3P54753 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
EPHB3P54753 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
EPHB3P54753 AC027088.4-201ENST00000611559 1947 ntBASIC6.37□□□□□ -1.39
EPHB3P54753 AC005618.1-201ENST00000606901 3148 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
EPHB3P54753 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
EPHB3P54753 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
EPHB3P54753 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
EPHB3P54753 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms