Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 BNIP3P35-201ENST00000604530 490 ntBASIC5.18□□□□□ -1.58
LIMK2P53671 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.18□□□□□ -1.58
LIMK2P53671 AP005131.7-201ENST00000610087 611 ntBASIC5.18□□□□□ -1.58
LIMK2P53671 AL391597.1-201ENST00000618707 694 ntBASIC5.18□□□□□ -1.58
LIMK2P53671 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.18□□□□□ -1.58
LIMK2P53671 AP002799.1-201ENST00000623552 423 ntBASIC5.18□□□□□ -1.58
LIMK2P53671 HSPA8P18-201ENST00000439846 1928 ntBASIC5.18□□□□□ -1.58
LIMK2P53671 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
LIMK2P53671 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
LIMK2P53671 HSPA8P14-201ENST00000552265 1805 ntBASIC5.18□□□□□ -1.58
LIMK2P53671 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
LIMK2P53671 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.18□□□□□ -1.58
LIMK2P53671 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
LIMK2P53671 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
LIMK2P53671 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
LIMK2P53671 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIMK2P53671 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
LIMK2P53671 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
LIMK2P53671 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIMK2P53671 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIMK2P53671 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIMK2P53671 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIMK2P53671 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
LIMK2P53671 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
LIMK2P53671 SNORA17.1-201ENST00000362945 126 ntBASIC5.17□□□□□ -1.58
LIMK2P53671 U3.3-201ENST00000362986 216 ntBASIC5.17□□□□□ -1.58
LIMK2P53671 RNA5SP90-201ENST00000364801 99 ntBASIC5.17□□□□□ -1.58
LIMK2P53671 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIMK2P53671 MIR550A3-201ENST00000390735 95 ntBASIC5.17□□□□□ -1.58
LIMK2P53671 AL589647.1-201ENST00000402485 466 ntBASIC5.17□□□□□ -1.58
LIMK2P53671 AL035079.1-201ENST00000405210 287 ntBASIC5.17□□□□□ -1.58
LIMK2P53671 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.17□□□□□ -1.58
LIMK2P53671 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.17□□□□□ -1.58
LIMK2P53671 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.17□□□□□ -1.58
LIMK2P53671 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.17□□□□□ -1.58
LIMK2P53671 AC097523.2-201ENST00000435551 652 ntBASIC5.17□□□□□ -1.58
LIMK2P53671 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.17□□□□□ -1.58
LIMK2P53671 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.17□□□□□ -1.58
LIMK2P53671 AC073850.1-201ENST00000449243 255 ntBASIC5.17□□□□□ -1.58
LIMK2P53671 AL356390.1-201ENST00000455684 397 ntBASIC5.17□□□□□ -1.58
LIMK2P53671 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LIMK2P53671 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LIMK2P53671 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.17□□□□□ -1.58
LIMK2P53671 RPS4XP20-201ENST00000505751 772 ntBASIC5.17□□□□□ -1.58
LIMK2P53671 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.17□□□□□ -1.58
LIMK2P53671 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.17□□□□□ -1.58
LIMK2P53671 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
LIMK2P53671 AC127381.1-201ENST00000555979 939 ntBASIC5.17□□□□□ -1.58
LIMK2P53671 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.17□□□□□ -1.58
LIMK2P53671 AC011840.5-201ENST00000582125 771 ntBASIC5.17□□□□□ -1.58
LIMK2P53671 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.17□□□□□ -1.58
LIMK2P53671 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.17□□□□□ -1.58
LIMK2P53671 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.17□□□□□ -1.58
LIMK2P53671 Z95327.3-201ENST00000610385 572 ntBASIC5.17□□□□□ -1.58
LIMK2P53671 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.17□□□□□ -1.58
LIMK2P53671 LINC01739-205ENST00000641890 573 ntBASIC5.17□□□□□ -1.58
LIMK2P53671 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
LIMK2P53671 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
LIMK2P53671 AC131971.1-201ENST00000332881 1482 ntBASIC5.17□□□□□ -1.58
LIMK2P53671 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
LIMK2P53671 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.17□□□□□ -1.58
LIMK2P53671 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIMK2P53671 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LIMK2P53671 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LIMK2P53671 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LIMK2P53671 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.16□□□□□ -1.58
LIMK2P53671 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LIMK2P53671 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LIMK2P53671 MTND5P23-201ENST00000430812 1655 ntBASIC5.16□□□□□ -1.58
LIMK2P53671 RNU6-891P-201ENST00000384280 111 ntBASIC5.16□□□□□ -1.58
LIMK2P53671 CTSL3P-202ENST00000412179 788 ntBASIC5.16□□□□□ -1.58
LIMK2P53671 RAB9AP4-201ENST00000415230 609 ntBASIC5.16□□□□□ -1.58
LIMK2P53671 AL121878.1-201ENST00000418638 859 ntBASIC5.16□□□□□ -1.58
LIMK2P53671 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.16□□□□□ -1.58
LIMK2P53671 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.16□□□□□ -1.58
LIMK2P53671 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.16□□□□□ -1.58
LIMK2P53671 RPL35AP21-201ENST00000437667 333 ntBASIC5.16□□□□□ -1.58
LIMK2P53671 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.16□□□□□ -1.58
LIMK2P53671 BX284632.1-201ENST00000478218 541 ntBASIC5.16□□□□□ -1.58
LIMK2P53671 AC091544.1-201ENST00000484702 348 ntBASIC5.16□□□□□ -1.58
LIMK2P53671 AGGF1P3-201ENST00000493675 1213 ntBASIC5.16□□□□□ -1.58
LIMK2P53671 AC002456.2-201ENST00000509356 380 ntBASIC5.16□□□□□ -1.58
LIMK2P53671 FTH1P11-201ENST00000517577 551 ntBASIC5.16□□□□□ -1.58
LIMK2P53671 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.16□□□□□ -1.58
LIMK2P53671 AC026616.1-201ENST00000523157 525 ntBASIC5.16□□□□□ -1.58
LIMK2P53671 AP000676.2-201ENST00000529711 301 ntBASIC5.16□□□□□ -1.58
LIMK2P53671 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.16□□□□□ -1.58
LIMK2P53671 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.16□□□□□ -1.58
LIMK2P53671 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.16□□□□□ -1.58
LIMK2P53671 AC133644.2-201ENST00000608142 540 ntBASIC5.16□□□□□ -1.58
LIMK2P53671 AC116651.1-201ENST00000609724 556 ntBASIC5.16□□□□□ -1.58
LIMK2P53671 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
LIMK2P53671 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LIMK2P53671 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.16□□□□□ -1.58
LIMK2P53671 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LIMK2P53671 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.16□□□□□ -1.58
LIMK2P53671 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.16□□□□□ -1.58
LIMK2P53671 THAP12P5-201ENST00000405864 2275 ntBASIC5.16□□□□□ -1.58
LIMK2P53671 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
LIMK2P53671 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms