Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.85□□□□□ -1.47
COPB1P53618 REREP1Y-201ENST00000422655 198 ntBASIC5.85□□□□□ -1.47
COPB1P53618 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
COPB1P53618 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.85□□□□□ -1.47
COPB1P53618 MTND2P21-201ENST00000436242 1042 ntBASIC5.85□□□□□ -1.47
COPB1P53618 SUMO2P3-201ENST00000438311 288 ntBASIC5.85□□□□□ -1.47
COPB1P53618 REREP2Y-201ENST00000439103 200 ntBASIC5.85□□□□□ -1.47
COPB1P53618 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.85□□□□□ -1.47
COPB1P53618 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.85□□□□□ -1.47
COPB1P53618 AC068587.2-201ENST00000478386 781 ntBASIC5.85□□□□□ -1.47
COPB1P53618 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COPB1P53618 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.85□□□□□ -1.47
COPB1P53618 SNORD46.2-201ENST00000516021 102 ntBASIC5.85□□□□□ -1.47
COPB1P53618 SCARNA16.4-201ENST00000516956 187 ntBASIC5.85□□□□□ -1.47
COPB1P53618 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.85□□□□□ -1.47
COPB1P53618 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.85□□□□□ -1.47
COPB1P53618 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.85□□□□□ -1.47
COPB1P53618 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.85□□□□□ -1.47
COPB1P53618 MTATP6P24-201ENST00000576835 677 ntBASIC5.85□□□□□ -1.47
COPB1P53618 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.85□□□□□ -1.47
COPB1P53618 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.85□□□□□ -1.47
COPB1P53618 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COPB1P53618 AC008115.3-201ENST00000614874 549 ntBASIC5.85□□□□□ -1.47
COPB1P53618 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.85□□□□□ -1.47
COPB1P53618 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.85□□□□□ -1.47
COPB1P53618 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.85□□□□□ -1.47
COPB1P53618 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
COPB1P53618 AL138820.1-201ENST00000617901 5305 ntBASIC5.85□□□□□ -1.47
COPB1P53618 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COPB1P53618 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COPB1P53618 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COPB1P53618 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
COPB1P53618 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
COPB1P53618 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.84□□□□□ -1.47
COPB1P53618 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
COPB1P53618 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
COPB1P53618 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
COPB1P53618 AC005005.4-201ENST00000623789 16698 ntBASIC5.84□□□□□ -1.47
COPB1P53618 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
COPB1P53618 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COPB1P53618 RNU4-2-201ENST00000365668 141 ntBASIC5.84□□□□□ -1.47
COPB1P53618 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
COPB1P53618 VN1R51P-201ENST00000411675 945 ntBASIC5.84□□□□□ -1.47
COPB1P53618 AL596448.1-201ENST00000415024 392 ntBASIC5.84□□□□□ -1.47
COPB1P53618 ARL2BPP3-201ENST00000421226 480 ntBASIC5.84□□□□□ -1.47
COPB1P53618 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.84□□□□□ -1.47
COPB1P53618 HMGB3P5-201ENST00000428894 612 ntBASIC5.84□□□□□ -1.47
COPB1P53618 BX119321.1-201ENST00000428912 797 ntBASIC5.84□□□□□ -1.47
COPB1P53618 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.84□□□□□ -1.47
COPB1P53618 GSTM5P1-201ENST00000434751 660 ntBASIC5.84□□□□□ -1.47
COPB1P53618 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COPB1P53618 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.84□□□□□ -1.47
COPB1P53618 TCEA1P3-201ENST00000443005 880 ntBASIC5.84□□□□□ -1.47
COPB1P53618 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.84□□□□□ -1.47
COPB1P53618 AL161636.2-201ENST00000445179 927 ntBASIC5.84□□□□□ -1.47
COPB1P53618 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
COPB1P53618 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.84□□□□□ -1.47
COPB1P53618 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.84□□□□□ -1.47
COPB1P53618 AC022336.1-201ENST00000475510 337 ntBASIC5.84□□□□□ -1.47
COPB1P53618 AC016687.1-201ENST00000482574 353 ntBASIC5.84□□□□□ -1.47
COPB1P53618 OR9N1P-202ENST00000494289 481 ntBASIC5.84□□□□□ -1.47
COPB1P53618 NIFKP7-201ENST00000503365 834 ntBASIC5.84□□□□□ -1.47
COPB1P53618 PRELID3BP6-201ENST00000503839 571 ntBASIC5.84□□□□□ -1.47
COPB1P53618 PSMA2P2-201ENST00000504319 686 ntBASIC5.84□□□□□ -1.47
COPB1P53618 HMGB1P44-201ENST00000508597 572 ntBASIC5.84□□□□□ -1.47
COPB1P53618 CYCSP22-201ENST00000517555 339 ntBASIC5.84□□□□□ -1.47
COPB1P53618 NRBF2P4-201ENST00000520874 850 ntBASIC5.84□□□□□ -1.47
COPB1P53618 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.84□□□□□ -1.47
COPB1P53618 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.84□□□□□ -1.47
COPB1P53618 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.84□□□□□ -1.47
COPB1P53618 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.84□□□□□ -1.47
COPB1P53618 AC011626.1-201ENST00000604710 562 ntBASIC5.84□□□□□ -1.47
COPB1P53618 AL121652.1-201ENST00000608851 448 ntBASIC5.84□□□□□ -1.47
COPB1P53618 AC140725.3-201ENST00000616193 880 ntBASIC5.84□□□□□ -1.47
COPB1P53618 MIR6886-201ENST00000619864 61 ntBASIC5.84□□□□□ -1.47
COPB1P53618 AC007275.1-201ENST00000621243 671 ntBASIC5.84□□□□□ -1.47
COPB1P53618 AP003476.1-201ENST00000623984 516 ntBASIC5.84□□□□□ -1.47
COPB1P53618 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.84□□□□□ -1.47
COPB1P53618 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.84□□□□□ -1.47
COPB1P53618 AC097063.1-201ENST00000426714 1797 ntBASIC5.84□□□□□ -1.47
COPB1P53618 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.84□□□□□ -1.47
COPB1P53618 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COPB1P53618 AL450345.1-202ENST00000605741 3881 ntBASIC5.84□□□□□ -1.48
COPB1P53618 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.84□□□□□ -1.48
COPB1P53618 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
COPB1P53618 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COPB1P53618 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.83□□□□□ -1.48
COPB1P53618 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COPB1P53618 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COPB1P53618 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
COPB1P53618 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
COPB1P53618 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.83□□□□□ -1.48
COPB1P53618 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
COPB1P53618 SEPT7P8-201ENST00000413308 775 ntBASIC5.83□□□□□ -1.48
COPB1P53618 Z68694.1-201ENST00000413929 841 ntBASIC5.83□□□□□ -1.48
COPB1P53618 CDY17P-201ENST00000414121 1282 ntBASIC5.83□□□□□ -1.48
COPB1P53618 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.83□□□□□ -1.48
COPB1P53618 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.83□□□□□ -1.48
COPB1P53618 MTCO2P23-201ENST00000425216 680 ntBASIC5.83□□□□□ -1.48
COPB1P53618 MTND6P12-201ENST00000428247 522 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms