Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
PDX1P52945 AC108157.1-201ENST00000510511 539 ntBASIC5.12□□□□□ -1.59
PDX1P52945 FABP5P6-201ENST00000510588 409 ntBASIC5.12□□□□□ -1.59
PDX1P52945 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.12□□□□□ -1.59
PDX1P52945 AC109464.1-201ENST00000511091 819 ntBASIC5.12□□□□□ -1.59
PDX1P52945 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.12□□□□□ -1.59
PDX1P52945 MTND1P36-201ENST00000522384 936 ntBASIC5.12□□□□□ -1.59
PDX1P52945 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PDX1P52945 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.12□□□□□ -1.59
PDX1P52945 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.12□□□□□ -1.59
PDX1P52945 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.12□□□□□ -1.59
PDX1P52945 AC104785.1-201ENST00000603220 588 ntBASIC5.12□□□□□ -1.59
PDX1P52945 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.12□□□□□ -1.59
PDX1P52945 AC007423.1-201ENST00000605009 627 ntBASIC5.12□□□□□ -1.59
PDX1P52945 AC005014.3-201ENST00000605985 190 ntBASIC5.12□□□□□ -1.59
PDX1P52945 AL355802.4-201ENST00000607635 548 ntBASIC5.12□□□□□ -1.59
PDX1P52945 AL592494.3-201ENST00000609485 464 ntBASIC5.12□□□□□ -1.59
PDX1P52945 AC241377.1-201ENST00000619797 406 ntBASIC5.12□□□□□ -1.59
PDX1P52945 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDX1P52945 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDX1P52945 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDX1P52945 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PDX1P52945 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDX1P52945 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
PDX1P52945 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDX1P52945 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDX1P52945 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDX1P52945 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.12□□□□□ -1.59
PDX1P52945 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.11□□□□□ -1.59
PDX1P52945 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDX1P52945 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.11□□□□□ -1.59
PDX1P52945 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDX1P52945 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDX1P52945 RNA5SP123-201ENST00000363244 119 ntBASIC5.11□□□□□ -1.59
PDX1P52945 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDX1P52945 PEX12P1-201ENST00000400284 1048 ntBASIC5.11□□□□□ -1.59
PDX1P52945 DBIP1-201ENST00000401435 260 ntBASIC5.11□□□□□ -1.59
PDX1P52945 AL807761.1-201ENST00000417622 171 ntBASIC5.11□□□□□ -1.59
PDX1P52945 RPS27AP6-201ENST00000427962 448 ntBASIC5.11□□□□□ -1.59
PDX1P52945 AL360081.1-201ENST00000428299 555 ntBASIC5.11□□□□□ -1.59
PDX1P52945 EIF2S2P3-201ENST00000428356 999 ntBASIC5.11□□□□□ -1.59
PDX1P52945 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.11□□□□□ -1.59
PDX1P52945 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.11□□□□□ -1.59
PDX1P52945 RPS3AP53-201ENST00000454716 778 ntBASIC5.11□□□□□ -1.59
PDX1P52945 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PDX1P52945 RPSAP51-201ENST00000497462 645 ntBASIC5.11□□□□□ -1.59
PDX1P52945 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.11□□□□□ -1.59
PDX1P52945 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC5.11□□□□□ -1.59
PDX1P52945 AC091912.1-201ENST00000511351 248 ntBASIC5.11□□□□□ -1.59
PDX1P52945 EIF3KP3-201ENST00000514461 639 ntBASIC5.11□□□□□ -1.59
PDX1P52945 SEPT10P1-201ENST00000517342 1162 ntBASIC5.11□□□□□ -1.59
PDX1P52945 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.11□□□□□ -1.59
PDX1P52945 BRD9P1-201ENST00000529855 560 ntBASIC5.11□□□□□ -1.59
PDX1P52945 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.11□□□□□ -1.59
PDX1P52945 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.11□□□□□ -1.59
PDX1P52945 AP002373.2-201ENST00000541631 1060 ntBASIC5.11□□□□□ -1.59
PDX1P52945 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDX1P52945 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PDX1P52945 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PDX1P52945 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.11□□□□□ -1.59
PDX1P52945 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.11□□□□□ -1.59
PDX1P52945 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.11□□□□□ -1.59
PDX1P52945 AC010632.3-201ENST00000611377 369 ntBASIC5.11□□□□□ -1.59
PDX1P52945 AC087385.3-201ENST00000620477 187 ntBASIC5.11□□□□□ -1.59
PDX1P52945 AC099494.2-201ENST00000623371 978 ntBASIC5.11□□□□□ -1.59
PDX1P52945 AP003499.2-201ENST00000624100 483 ntBASIC5.11□□□□□ -1.59
PDX1P52945 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PDX1P52945 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PDX1P52945 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDX1P52945 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDX1P52945 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.11□□□□□ -1.59
PDX1P52945 AC092111.2-201ENST00000611627 1414 ntBASIC5.11□□□□□ -1.59
PDX1P52945 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDX1P52945 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.11□□□□□ -1.59
PDX1P52945 AL034549.2-201ENST00000618285 3373 ntBASIC5.11□□□□□ -1.59
PDX1P52945 AL442128.2-201ENST00000620246 1824 ntBASIC5.11□□□□□ -1.59
PDX1P52945 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDX1P52945 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDX1P52945 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PDX1P52945 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.1□□□□□ -1.59
PDX1P52945 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PDX1P52945 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PDX1P52945 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
PDX1P52945 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PDX1P52945 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDX1P52945 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PDX1P52945 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDX1P52945 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDX1P52945 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PDX1P52945 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PDX1P52945 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PDX1P52945 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PDX1P52945 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDX1P52945 OR6K3-202ENST00000368146 996 ntBASIC5.1□□□□□ -1.59
PDX1P52945 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PDX1P52945 AL356317.1-201ENST00000396110 1436 ntBASIC5.1□□□□□ -1.59
PDX1P52945 CYB5AP4-201ENST00000396692 399 ntBASIC5.1□□□□□ -1.59
PDX1P52945 ADAM24P-201ENST00000398655 2101 ntBASIC5.1□□□□□ -1.59
PDX1P52945 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PDX1P52945 CHMP1B2P-201ENST00000399581 597 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms