Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CASP4P49662 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.38□□□□□ -1.55
CASP4P49662 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
CASP4P49662 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CASP4P49662 RN7SKP104-201ENST00000362605 328 ntBASIC5.38□□□□□ -1.55
CASP4P49662 RNA5SP305-201ENST00000362665 119 ntBASIC5.38□□□□□ -1.55
CASP4P49662 RN7SKP95-201ENST00000362860 303 ntBASIC5.38□□□□□ -1.55
CASP4P49662 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.38□□□□□ -1.55
CASP4P49662 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.38□□□□□ -1.55
CASP4P49662 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.38□□□□□ -1.55
CASP4P49662 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.38□□□□□ -1.55
CASP4P49662 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.38□□□□□ -1.55
CASP4P49662 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.38□□□□□ -1.55
CASP4P49662 COX6B1P2-201ENST00000489624 230 ntBASIC5.38□□□□□ -1.55
CASP4P49662 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.38□□□□□ -1.55
CASP4P49662 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.38□□□□□ -1.55
CASP4P49662 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.38□□□□□ -1.55
CASP4P49662 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.38□□□□□ -1.55
CASP4P49662 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.38□□□□□ -1.55
CASP4P49662 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.38□□□□□ -1.55
CASP4P49662 AC044860.2-201ENST00000561005 179 ntBASIC5.38□□□□□ -1.55
CASP4P49662 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.38□□□□□ -1.55
CASP4P49662 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.38□□□□□ -1.55
CASP4P49662 AC011453.2-201ENST00000603737 729 ntBASIC5.38□□□□□ -1.55
CASP4P49662 AC090510.2-201ENST00000617465 629 ntBASIC5.38□□□□□ -1.55
CASP4P49662 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.38□□□□□ -1.55
CASP4P49662 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CASP4P49662 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CASP4P49662 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CASP4P49662 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CASP4P49662 THAP12P5-201ENST00000405864 2275 ntBASIC5.37□□□□□ -1.55
CASP4P49662 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CASP4P49662 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CASP4P49662 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CASP4P49662 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.37□□□□□ -1.55
CASP4P49662 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CASP4P49662 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.37□□□□□ -1.55
CASP4P49662 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.37□□□□□ -1.55
CASP4P49662 SNORA70-201ENST00000384436 135 ntBASIC5.37□□□□□ -1.55
CASP4P49662 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CASP4P49662 AL078599.1-201ENST00000402075 293 ntBASIC5.37□□□□□ -1.55
CASP4P49662 TBCAP2-201ENST00000416175 326 ntBASIC5.37□□□□□ -1.55
CASP4P49662 RPL7P11-201ENST00000437586 658 ntBASIC5.37□□□□□ -1.55
CASP4P49662 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.37□□□□□ -1.55
CASP4P49662 MYO5BP2-201ENST00000449815 1277 ntBASIC5.37□□□□□ -1.55
CASP4P49662 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.37□□□□□ -1.55
CASP4P49662 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.37□□□□□ -1.55
CASP4P49662 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.37□□□□□ -1.55
CASP4P49662 RPL23AP56-201ENST00000460778 453 ntBASIC5.37□□□□□ -1.55
CASP4P49662 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.37□□□□□ -1.55
CASP4P49662 RN7SL319P-201ENST00000480656 221 ntBASIC5.37□□□□□ -1.55
CASP4P49662 AC004453.1-201ENST00000487895 408 ntBASIC5.37□□□□□ -1.55
CASP4P49662 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.37□□□□□ -1.55
CASP4P49662 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.37□□□□□ -1.55
CASP4P49662 EIF4EP5-201ENST00000528228 640 ntBASIC5.37□□□□□ -1.55
CASP4P49662 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CASP4P49662 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CASP4P49662 AL049830.4-201ENST00000555149 351 ntBASIC5.37□□□□□ -1.55
CASP4P49662 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.37□□□□□ -1.55
CASP4P49662 AL356752.1-201ENST00000615844 593 ntBASIC5.37□□□□□ -1.55
CASP4P49662 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.37□□□□□ -1.55
CASP4P49662 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.37□□□□□ -1.55
CASP4P49662 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CASP4P49662 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CASP4P49662 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.37□□□□□ -1.55
CASP4P49662 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CASP4P49662 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CASP4P49662 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
CASP4P49662 OR9K1P-202ENST00000641111 3217 ntBASIC5.36□□□□□ -1.55
CASP4P49662 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CASP4P49662 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CASP4P49662 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CASP4P49662 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.36□□□□□ -1.55
CASP4P49662 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CASP4P49662 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CASP4P49662 MTHFD2P5-201ENST00000320415 844 ntBASIC5.36□□□□□ -1.55
CASP4P49662 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CASP4P49662 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CASP4P49662 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.36□□□□□ -1.55
CASP4P49662 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.36□□□□□ -1.55
CASP4P49662 TRY2P-201ENST00000448860 689 ntBASIC5.36□□□□□ -1.55
CASP4P49662 AC026348.1-201ENST00000462549 1053 ntBASIC5.36□□□□□ -1.55
CASP4P49662 AC093270.2-201ENST00000486157 792 ntBASIC5.36□□□□□ -1.55
CASP4P49662 RN7SL97P-201ENST00000486780 299 ntBASIC5.36□□□□□ -1.55
CASP4P49662 AC140172.1-201ENST00000502928 141 ntBASIC5.36□□□□□ -1.55
CASP4P49662 ENPP7P9-201ENST00000514456 627 ntBASIC5.36□□□□□ -1.55
CASP4P49662 MORF4L1P3-201ENST00000525966 950 ntBASIC5.36□□□□□ -1.55
CASP4P49662 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CASP4P49662 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.36□□□□□ -1.55
CASP4P49662 LSM3P2-201ENST00000551246 273 ntBASIC5.36□□□□□ -1.55
CASP4P49662 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.36□□□□□ -1.55
CASP4P49662 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.36□□□□□ -1.55
CASP4P49662 AL713998.2-201ENST00000604538 1198 ntBASIC5.36□□□□□ -1.55
CASP4P49662 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CASP4P49662 EIF3FP1-201ENST00000613970 806 ntBASIC5.36□□□□□ -1.55
CASP4P49662 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
CASP4P49662 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.36□□□□□ -1.55
CASP4P49662 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CASP4P49662 IRF5P1-201ENST00000504852 2164 ntBASIC5.36□□□□□ -1.55
CASP4P49662 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms