Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.73□□□□□ -1.65
RFC3P40938 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RFC3P40938 MIR4700-201ENST00000578311 74 ntBASIC4.73□□□□□ -1.65
RFC3P40938 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.73□□□□□ -1.65
RFC3P40938 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.73□□□□□ -1.65
RFC3P40938 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.73□□□□□ -1.65
RFC3P40938 AC026367.3-201ENST00000619032 590 ntBASIC4.73□□□□□ -1.65
RFC3P40938 MTCO1P1-201ENST00000624263 1081 ntBASIC4.73□□□□□ -1.65
RFC3P40938 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.73□□□□□ -1.65
RFC3P40938 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.73□□□□□ -1.65
RFC3P40938 AC135068.12-201ENST00000637370 931 ntBASIC4.73□□□□□ -1.65
RFC3P40938 MIPEPP2-201ENST00000422560 1819 ntBASIC4.73□□□□□ -1.65
RFC3P40938 AC104623.2-202ENST00000623477 4002 ntBASIC4.73□□□□□ -1.65
RFC3P40938 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.73□□□□□ -1.65
RFC3P40938 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RFC3P40938 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RFC3P40938 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
RFC3P40938 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RFC3P40938 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RFC3P40938 MTND5P23-201ENST00000430812 1655 ntBASIC4.73□□□□□ -1.65
RFC3P40938 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RFC3P40938 CUL4AP1-201ENST00000514750 1863 ntBASIC4.73□□□□□ -1.65
RFC3P40938 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RFC3P40938 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RFC3P40938 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RFC3P40938 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RFC3P40938 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
RFC3P40938 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.72□□□□□ -1.65
RFC3P40938 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RFC3P40938 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RFC3P40938 RN7SKP104-201ENST00000362605 328 ntBASIC4.72□□□□□ -1.65
RFC3P40938 SNORA51.8-201ENST00000384234 132 ntBASIC4.72□□□□□ -1.65
RFC3P40938 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RFC3P40938 CHMP1B2P-201ENST00000399581 597 ntBASIC4.72□□□□□ -1.65
RFC3P40938 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.72□□□□□ -1.65
RFC3P40938 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.72□□□□□ -1.65
RFC3P40938 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RFC3P40938 RPS4XP16-201ENST00000427198 791 ntBASIC4.72□□□□□ -1.65
RFC3P40938 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.72□□□□□ -1.65
RFC3P40938 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.72□□□□□ -1.65
RFC3P40938 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.72□□□□□ -1.65
RFC3P40938 OR52Y1P-201ENST00000452418 828 ntBASIC4.72□□□□□ -1.65
RFC3P40938 AP002371.1-201ENST00000463604 433 ntBASIC4.72□□□□□ -1.65
RFC3P40938 RPS23P1-201ENST00000491662 432 ntBASIC4.72□□□□□ -1.65
RFC3P40938 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RFC3P40938 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
RFC3P40938 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.72□□□□□ -1.65
RFC3P40938 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.72□□□□□ -1.65
RFC3P40938 AP001922.4-201ENST00000526967 290 ntBASIC4.72□□□□□ -1.65
RFC3P40938 QTRT1P1-201ENST00000604344 1078 ntBASIC4.72□□□□□ -1.65
RFC3P40938 AL713998.2-201ENST00000604538 1198 ntBASIC4.72□□□□□ -1.65
RFC3P40938 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
RFC3P40938 AC009950.2-201ENST00000636548 183 ntBASIC4.72□□□□□ -1.65
RFC3P40938 CASC19-221ENST00000641309 1382 ntBASIC4.72□□□□□ -1.65
RFC3P40938 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.72□□□□□ -1.65
RFC3P40938 AC023421.1-201ENST00000590535 1785 ntBASIC4.72□□□□□ -1.65
RFC3P40938 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.72□□□□□ -1.65
RFC3P40938 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.72□□□□□ -1.65
RFC3P40938 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RFC3P40938 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.72□□□□□ -1.65
RFC3P40938 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
RFC3P40938 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RFC3P40938 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
RFC3P40938 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RFC3P40938 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RFC3P40938 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.72□□□□□ -1.65
RFC3P40938 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.72□□□□□ -1.65
RFC3P40938 AC079298.1-201ENST00000625026 1619 ntBASIC4.72□□□□□ -1.65
RFC3P40938 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RFC3P40938 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.72□□□□□ -1.65
RFC3P40938 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
RFC3P40938 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
RFC3P40938 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
RFC3P40938 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
RFC3P40938 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
RFC3P40938 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
RFC3P40938 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RFC3P40938 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
RFC3P40938 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RFC3P40938 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RFC3P40938 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFC3P40938 RNU6-167P-201ENST00000384292 106 ntBASIC4.71□□□□□ -1.66
RFC3P40938 OR8V1P-201ENST00000395193 873 ntBASIC4.71□□□□□ -1.66
RFC3P40938 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFC3P40938 AL359643.1-201ENST00000404109 423 ntBASIC4.71□□□□□ -1.66
RFC3P40938 MIR1182-201ENST00000408363 97 ntBASIC4.71□□□□□ -1.66
RFC3P40938 AL139128.1-201ENST00000413921 941 ntBASIC4.71□□□□□ -1.66
RFC3P40938 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.71□□□□□ -1.66
RFC3P40938 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RFC3P40938 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.71□□□□□ -1.66
RFC3P40938 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.71□□□□□ -1.66
RFC3P40938 RHOT1P3-201ENST00000436571 331 ntBASIC4.71□□□□□ -1.66
RFC3P40938 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.71□□□□□ -1.66
RFC3P40938 ARAFP2-201ENST00000440565 559 ntBASIC4.71□□□□□ -1.66
RFC3P40938 HIGD1AP8-201ENST00000453927 274 ntBASIC4.71□□□□□ -1.66
RFC3P40938 AC239798.3-201ENST00000454459 408 ntBASIC4.71□□□□□ -1.66
RFC3P40938 AC079168.1-201ENST00000458741 345 ntBASIC4.71□□□□□ -1.66
RFC3P40938 RN7SL189P-201ENST00000468631 289 ntBASIC4.71□□□□□ -1.66
RFC3P40938 AC083982.1-201ENST00000485679 344 ntBASIC4.71□□□□□ -1.66
RFC3P40938 RPL7P41-201ENST00000485823 957 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms