Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 NDUFA5P9-201ENST00000472609 340 ntBASIC5.81□□□□□ -1.48
HOXC6P09630 MRPS33P2-201ENST00000507850 322 ntBASIC5.81□□□□□ -1.48
HOXC6P09630 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.81□□□□□ -1.48
HOXC6P09630 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.81□□□□□ -1.48
HOXC6P09630 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.81□□□□□ -1.48
HOXC6P09630 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.81□□□□□ -1.48
HOXC6P09630 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.81□□□□□ -1.48
HOXC6P09630 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HOXC6P09630 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.81□□□□□ -1.48
HOXC6P09630 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.81□□□□□ -1.48
HOXC6P09630 AC009120.7-201ENST00000623452 780 ntBASIC5.81□□□□□ -1.48
HOXC6P09630 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
HOXC6P09630 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
HOXC6P09630 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.81□□□□□ -1.48
HOXC6P09630 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HOXC6P09630 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HOXC6P09630 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HOXC6P09630 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.81□□□□□ -1.48
HOXC6P09630 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HOXC6P09630 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
HOXC6P09630 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HOXC6P09630 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HOXC6P09630 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.8□□□□□ -1.48
HOXC6P09630 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HOXC6P09630 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.8□□□□□ -1.48
HOXC6P09630 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.8□□□□□ -1.48
HOXC6P09630 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HOXC6P09630 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
HOXC6P09630 AC126755.2-208ENST00000327792 462 ntBASIC5.8□□□□□ -1.48
HOXC6P09630 AC138969.1-213ENST00000331436 462 ntBASIC5.8□□□□□ -1.48
HOXC6P09630 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HOXC6P09630 RN7SKP100-201ENST00000411258 284 ntBASIC5.8□□□□□ -1.48
HOXC6P09630 AL158827.1-201ENST00000416300 391 ntBASIC5.8□□□□□ -1.48
HOXC6P09630 COX6CP17-201ENST00000421389 185 ntBASIC5.8□□□□□ -1.48
HOXC6P09630 C4BPAP2-201ENST00000428434 478 ntBASIC5.8□□□□□ -1.48
HOXC6P09630 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.8□□□□□ -1.48
HOXC6P09630 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.8□□□□□ -1.48
HOXC6P09630 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.8□□□□□ -1.48
HOXC6P09630 AL359265.1-201ENST00000440296 795 ntBASIC5.8□□□□□ -1.48
HOXC6P09630 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.8□□□□□ -1.48
HOXC6P09630 AL137845.2-201ENST00000444292 988 ntBASIC5.8□□□□□ -1.48
HOXC6P09630 AL354714.3-201ENST00000447284 493 ntBASIC5.8□□□□□ -1.48
HOXC6P09630 RN7SL385P-201ENST00000468873 276 ntBASIC5.8□□□□□ -1.48
HOXC6P09630 AC025181.1-201ENST00000477507 416 ntBASIC5.8□□□□□ -1.48
HOXC6P09630 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.8□□□□□ -1.48
HOXC6P09630 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.8□□□□□ -1.48
HOXC6P09630 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.8□□□□□ -1.48
HOXC6P09630 OR4R2P-201ENST00000530815 597 ntBASIC5.8□□□□□ -1.48
HOXC6P09630 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.8□□□□□ -1.48
HOXC6P09630 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
HOXC6P09630 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.8□□□□□ -1.48
HOXC6P09630 AC126365.2-201ENST00000580630 379 ntBASIC5.8□□□□□ -1.48
HOXC6P09630 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.8□□□□□ -1.48
HOXC6P09630 MIR5096-201ENST00000583713 70 ntBASIC5.8□□□□□ -1.48
HOXC6P09630 MIR4420-201ENST00000583944 77 ntBASIC5.8□□□□□ -1.48
HOXC6P09630 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.8□□□□□ -1.48
HOXC6P09630 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.8□□□□□ -1.48
HOXC6P09630 AC108738.1-201ENST00000603703 237 ntBASIC5.8□□□□□ -1.48
HOXC6P09630 AC104687.2-201ENST00000604442 342 ntBASIC5.8□□□□□ -1.48
HOXC6P09630 AC012414.7-202ENST00000622705 1090 ntBASIC5.8□□□□□ -1.48
HOXC6P09630 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.8□□□□□ -1.48
HOXC6P09630 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.8□□□□□ -1.48
HOXC6P09630 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HOXC6P09630 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HOXC6P09630 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HOXC6P09630 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
HOXC6P09630 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.8□□□□□ -1.48
HOXC6P09630 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HOXC6P09630 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.8□□□□□ -1.48
HOXC6P09630 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
HOXC6P09630 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
HOXC6P09630 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
HOXC6P09630 AC139426.3-201ENST00000605648 2059 ntBASIC5.79□□□□□ -1.48
HOXC6P09630 ZNF402P-201ENST00000404435 3100 ntBASIC5.79□□□□□ -1.48
HOXC6P09630 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.79□□□□□ -1.48
HOXC6P09630 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC6P09630 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC6P09630 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
HOXC6P09630 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC6P09630 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.79□□□□□ -1.48
HOXC6P09630 AL137058.3-201ENST00000624531 3099 ntBASIC5.79□□□□□ -1.48
HOXC6P09630 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC6P09630 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC6P09630 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
HOXC6P09630 RN7SKP145-201ENST00000363291 303 ntBASIC5.79□□□□□ -1.48
HOXC6P09630 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC6P09630 HMGB3P7-201ENST00000400214 611 ntBASIC5.79□□□□□ -1.48
HOXC6P09630 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
HOXC6P09630 RPL7P58-201ENST00000402913 758 ntBASIC5.79□□□□□ -1.48
HOXC6P09630 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXC6P09630 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXC6P09630 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.79□□□□□ -1.48
HOXC6P09630 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC6P09630 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXC6P09630 DNAJC19P7-201ENST00000428811 344 ntBASIC5.79□□□□□ -1.48
HOXC6P09630 AC023271.1-201ENST00000445936 1090 ntBASIC5.79□□□□□ -1.48
HOXC6P09630 NOP56P2-201ENST00000447491 769 ntBASIC5.79□□□□□ -1.48
HOXC6P09630 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.79□□□□□ -1.48
HOXC6P09630 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXC6P09630 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms