Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC005618.4-201ENST00000625053 554 ntBASIC5.74□□□□□ -1.49
MMP3P08254 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.74□□□□□ -1.49
MMP3P08254 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
MMP3P08254 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
MMP3P08254 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
MMP3P08254 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
MMP3P08254 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.74□□□□□ -1.49
MMP3P08254 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.74□□□□□ -1.49
MMP3P08254 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MMP3P08254 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MMP3P08254 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MMP3P08254 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MMP3P08254 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MMP3P08254 GAPDHP15-201ENST00000398586 975 ntBASIC5.73□□□□□ -1.49
MMP3P08254 AP002530.1-201ENST00000405705 684 ntBASIC5.73□□□□□ -1.49
MMP3P08254 FAR2P2-201ENST00000413041 594 ntBASIC5.73□□□□□ -1.49
MMP3P08254 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.73□□□□□ -1.49
MMP3P08254 AL133482.1-201ENST00000415988 498 ntBASIC5.73□□□□□ -1.49
MMP3P08254 AL354692.1-201ENST00000423044 315 ntBASIC5.73□□□□□ -1.49
MMP3P08254 FAR2P4-202ENST00000425399 584 ntBASIC5.73□□□□□ -1.49
MMP3P08254 AC073508.1-201ENST00000428866 656 ntBASIC5.73□□□□□ -1.49
MMP3P08254 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.73□□□□□ -1.49
MMP3P08254 RPL21P133-201ENST00000443666 476 ntBASIC5.73□□□□□ -1.49
MMP3P08254 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.73□□□□□ -1.49
MMP3P08254 RPS29P33-201ENST00000456717 146 ntBASIC5.73□□□□□ -1.49
MMP3P08254 AC020779.1-201ENST00000478757 796 ntBASIC5.73□□□□□ -1.49
MMP3P08254 CEACAMP10-202ENST00000495431 496 ntBASIC5.73□□□□□ -1.49
MMP3P08254 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.73□□□□□ -1.49
MMP3P08254 RPS24P16-201ENST00000497294 392 ntBASIC5.73□□□□□ -1.49
MMP3P08254 AC105420.1-201ENST00000504389 582 ntBASIC5.73□□□□□ -1.49
MMP3P08254 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.73□□□□□ -1.49
MMP3P08254 HMGN1P15-201ENST00000513870 295 ntBASIC5.73□□□□□ -1.49
MMP3P08254 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.73□□□□□ -1.49
MMP3P08254 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.73□□□□□ -1.49
MMP3P08254 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.73□□□□□ -1.49
MMP3P08254 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.73□□□□□ -1.49
MMP3P08254 AC027281.1-201ENST00000574178 758 ntBASIC5.73□□□□□ -1.49
MMP3P08254 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.73□□□□□ -1.49
MMP3P08254 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.73□□□□□ -1.49
MMP3P08254 AC241377.1-201ENST00000619797 406 ntBASIC5.73□□□□□ -1.49
MMP3P08254 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MMP3P08254 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MMP3P08254 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MMP3P08254 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MMP3P08254 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MMP3P08254 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MMP3P08254 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.73□□□□□ -1.49
MMP3P08254 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MMP3P08254 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MMP3P08254 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MMP3P08254 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MMP3P08254 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MMP3P08254 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.72□□□□□ -1.49
MMP3P08254 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
MMP3P08254 AL356057.1-202ENST00000402263 756 ntBASIC5.72□□□□□ -1.49
MMP3P08254 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.72□□□□□ -1.49
MMP3P08254 AL359265.1-201ENST00000440296 795 ntBASIC5.72□□□□□ -1.49
MMP3P08254 AC112498.1-201ENST00000444401 332 ntBASIC5.72□□□□□ -1.49
MMP3P08254 AC009220.1-201ENST00000451614 275 ntBASIC5.72□□□□□ -1.49
MMP3P08254 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.72□□□□□ -1.49
MMP3P08254 RN7SL814P-201ENST00000487715 300 ntBASIC5.72□□□□□ -1.49
MMP3P08254 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.72□□□□□ -1.49
MMP3P08254 AC097173.1-201ENST00000505862 819 ntBASIC5.72□□□□□ -1.49
MMP3P08254 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.72□□□□□ -1.49
MMP3P08254 AC010374.2-201ENST00000512933 535 ntBASIC5.72□□□□□ -1.49
MMP3P08254 OR7H2P-201ENST00000513483 306 ntBASIC5.72□□□□□ -1.49
MMP3P08254 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.72□□□□□ -1.49
MMP3P08254 AC117525.1-201ENST00000515228 503 ntBASIC5.72□□□□□ -1.49
MMP3P08254 RN7SKP157-201ENST00000516174 282 ntBASIC5.72□□□□□ -1.49
MMP3P08254 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.72□□□□□ -1.49
MMP3P08254 OR8Q1P-201ENST00000526467 655 ntBASIC5.72□□□□□ -1.49
MMP3P08254 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.72□□□□□ -1.49
MMP3P08254 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.72□□□□□ -1.49
MMP3P08254 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
MMP3P08254 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MMP3P08254 AC074029.2-201ENST00000551045 634 ntBASIC5.72□□□□□ -1.49
MMP3P08254 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.72□□□□□ -1.49
MMP3P08254 AC063949.1-201ENST00000552900 865 ntBASIC5.72□□□□□ -1.49
MMP3P08254 CKS1BP1-201ENST00000555221 240 ntBASIC5.72□□□□□ -1.49
MMP3P08254 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.72□□□□□ -1.49
MMP3P08254 AC106785.3-201ENST00000564064 847 ntBASIC5.72□□□□□ -1.49
MMP3P08254 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.72□□□□□ -1.49
MMP3P08254 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.72□□□□□ -1.49
MMP3P08254 MIR4737-201ENST00000583979 81 ntBASIC5.72□□□□□ -1.49
MMP3P08254 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.72□□□□□ -1.49
MMP3P08254 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.72□□□□□ -1.49
MMP3P08254 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.72□□□□□ -1.49
MMP3P08254 AC012078.1-201ENST00000405035 1646 ntBASIC5.72□□□□□ -1.49
MMP3P08254 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MMP3P08254 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MMP3P08254 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
MMP3P08254 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MMP3P08254 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MMP3P08254 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.72□□□□□ -1.49
MMP3P08254 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.72□□□□□ -1.49
MMP3P08254 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
MMP3P08254 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.72□□□□□ -1.49
MMP3P08254 AL136520.1-201ENST00000600311 1322 ntBASIC5.72□□□□□ -1.49
MMP3P08254 AC007159.1-201ENST00000566529 4706 ntBASIC5.72□□□□□ -1.49
MMP3P08254 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms