Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DQB2P05538 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DQB2P05538 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DQB2P05538 AL022393.1-201ENST00000625142 1677 ntBASIC4.92□□□□□ -1.62
HLA-DQB2P05538 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HLA-DQB2P05538 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DQB2P05538 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DQB2P05538 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HLA-DQB2P05538 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DQB2P05538 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DQB2P05538 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.92□□□□□ -1.62
HLA-DQB2P05538 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DQB2P05538 AC008549.2-201ENST00000333482 706 ntBASIC4.92□□□□□ -1.62
HLA-DQB2P05538 U3.30-201ENST00000391308 210 ntBASIC4.92□□□□□ -1.62
HLA-DQB2P05538 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.92□□□□□ -1.62
HLA-DQB2P05538 DPPA2P2-201ENST00000418220 897 ntBASIC4.92□□□□□ -1.62
HLA-DQB2P05538 RPL12P43-201ENST00000420608 499 ntBASIC4.92□□□□□ -1.62
HLA-DQB2P05538 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DQB2P05538 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DQB2P05538 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DQB2P05538 SLC25A18P1-201ENST00000449385 454 ntBASIC4.92□□□□□ -1.62
HLA-DQB2P05538 RHEBP2-201ENST00000450289 600 ntBASIC4.92□□□□□ -1.62
HLA-DQB2P05538 AC010733.1-201ENST00000451515 401 ntBASIC4.92□□□□□ -1.62
HLA-DQB2P05538 AC234781.3-201ENST00000452540 973 ntBASIC4.92□□□□□ -1.62
HLA-DQB2P05538 AC093270.2-201ENST00000486157 792 ntBASIC4.92□□□□□ -1.62
HLA-DQB2P05538 NPM1P21-201ENST00000513394 762 ntBASIC4.92□□□□□ -1.62
HLA-DQB2P05538 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DQB2P05538 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.92□□□□□ -1.62
HLA-DQB2P05538 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.92□□□□□ -1.62
HLA-DQB2P05538 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DQB2P05538 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DQB2P05538 AC093249.4-201ENST00000564755 259 ntBASIC4.92□□□□□ -1.62
HLA-DQB2P05538 AC007497.1-201ENST00000610421 561 ntBASIC4.92□□□□□ -1.62
HLA-DQB2P05538 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DQB2P05538 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
HLA-DQB2P05538 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
HLA-DQB2P05538 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DQB2P05538 DDX18P5-201ENST00000534547 1306 ntBASIC4.92□□□□□ -1.62
HLA-DQB2P05538 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DQB2P05538 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DQB2P05538 SAMMSON-226ENST00000642089 1582 ntBASIC4.91□□□□□ -1.62
HLA-DQB2P05538 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DQB2P05538 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.91□□□□□ -1.62
HLA-DQB2P05538 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DQB2P05538 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DQB2P05538 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HLA-DQB2P05538 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DQB2P05538 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.91□□□□□ -1.62
HLA-DQB2P05538 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HLA-DQB2P05538 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HLA-DQB2P05538 CTSL3P-202ENST00000412179 788 ntBASIC4.91□□□□□ -1.62
HLA-DQB2P05538 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.91□□□□□ -1.62
HLA-DQB2P05538 COX6B1P1-201ENST00000415962 213 ntBASIC4.91□□□□□ -1.62
HLA-DQB2P05538 AC017078.1-201ENST00000416146 368 ntBASIC4.91□□□□□ -1.62
HLA-DQB2P05538 AL645608.4-201ENST00000423619 154 ntBASIC4.91□□□□□ -1.62
HLA-DQB2P05538 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC4.91□□□□□ -1.62
HLA-DQB2P05538 CKS1BP6-201ENST00000424932 240 ntBASIC4.91□□□□□ -1.62
HLA-DQB2P05538 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.91□□□□□ -1.62
HLA-DQB2P05538 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.91□□□□□ -1.62
HLA-DQB2P05538 RPL7P61-201ENST00000451721 751 ntBASIC4.91□□□□□ -1.62
HLA-DQB2P05538 AURKAPS2-201ENST00000454983 333 ntBASIC4.91□□□□□ -1.62
HLA-DQB2P05538 RN7SL329P-201ENST00000467740 299 ntBASIC4.91□□□□□ -1.62
HLA-DQB2P05538 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DQB2P05538 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DQB2P05538 HMGB3P16-201ENST00000508037 287 ntBASIC4.91□□□□□ -1.62
HLA-DQB2P05538 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DQB2P05538 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DQB2P05538 LSM3P2-201ENST00000551246 273 ntBASIC4.91□□□□□ -1.62
HLA-DQB2P05538 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DQB2P05538 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.91□□□□□ -1.62
HLA-DQB2P05538 MIR4646-201ENST00000580775 63 ntBASIC4.91□□□□□ -1.62
HLA-DQB2P05538 AC011487.3-201ENST00000593607 453 ntBASIC4.91□□□□□ -1.62
HLA-DQB2P05538 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.91□□□□□ -1.62
HLA-DQB2P05538 AL121932.1-201ENST00000605542 214 ntBASIC4.91□□□□□ -1.62
HLA-DQB2P05538 OR51C1P-201ENST00000608504 942 ntBASIC4.91□□□□□ -1.62
HLA-DQB2P05538 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.91□□□□□ -1.62
HLA-DQB2P05538 CR381572.2-201ENST00000624852 397 ntBASIC4.91□□□□□ -1.62
HLA-DQB2P05538 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DQB2P05538 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.91□□□□□ -1.62
HLA-DQB2P05538 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HLA-DQB2P05538 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-DQB2P05538 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-DQB2P05538 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-DQB2P05538 SMG1P6-201ENST00000532337 2930 ntBASIC4.9□□□□□ -1.62
HLA-DQB2P05538 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.9□□□□□ -1.62
HLA-DQB2P05538 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.9□□□□□ -1.62
HLA-DQB2P05538 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-DQB2P05538 AC003985.2-201ENST00000562268 1669 ntBASIC4.9□□□□□ -1.62
HLA-DQB2P05538 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-DQB2P05538 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
HLA-DQB2P05538 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DQB2P05538 AL645733.1-201ENST00000402250 217 ntBASIC4.9□□□□□ -1.63
HLA-DQB2P05538 U3.35-201ENST00000408405 208 ntBASIC4.9□□□□□ -1.63
HLA-DQB2P05538 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DQB2P05538 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DQB2P05538 EIF4HP2-201ENST00000424380 563 ntBASIC4.9□□□□□ -1.63
HLA-DQB2P05538 OR2AH1P-201ENST00000425717 928 ntBASIC4.9□□□□□ -1.63
HLA-DQB2P05538 MGAT2P2-201ENST00000427194 797 ntBASIC4.9□□□□□ -1.63
HLA-DQB2P05538 RPS17P8-201ENST00000434525 335 ntBASIC4.9□□□□□ -1.63
HLA-DQB2P05538 OR52J1P-201ENST00000450596 932 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms