Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 MIR3176-201ENST00000582210 90 ntBASIC4.47□□□□□ -1.69
HLA-DPB1P04440 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DPB1P04440 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DPB1P04440 AC008115.4-201ENST00000619780 775 ntBASIC4.47□□□□□ -1.69
HLA-DPB1P04440 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DPB1P04440 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.47□□□□□ -1.69
HLA-DPB1P04440 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DPB1P04440 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.47□□□□□ -1.69
HLA-DPB1P04440 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HLA-DPB1P04440 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DPB1P04440 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
HLA-DPB1P04440 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.46□□□□□ -1.69
HLA-DPB1P04440 MIPEPP2-201ENST00000422560 1819 ntBASIC4.46□□□□□ -1.69
HLA-DPB1P04440 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-DPB1P04440 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DPB1P04440 DDX18P4-201ENST00000511690 1966 ntBASIC4.46□□□□□ -1.7
HLA-DPB1P04440 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DPB1P04440 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DPB1P04440 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DPB1P04440 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DPB1P04440 RNA5SP183-201ENST00000362452 119 ntBASIC4.46□□□□□ -1.7
HLA-DPB1P04440 U3.2-201ENST00000362981 210 ntBASIC4.46□□□□□ -1.7
HLA-DPB1P04440 MIR600-201ENST00000385007 98 ntBASIC4.46□□□□□ -1.7
HLA-DPB1P04440 MIR1286-201ENST00000408112 78 ntBASIC4.46□□□□□ -1.7
HLA-DPB1P04440 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.46□□□□□ -1.7
HLA-DPB1P04440 EIF4HP2-201ENST00000424380 563 ntBASIC4.46□□□□□ -1.7
HLA-DPB1P04440 AC108075.1-201ENST00000424692 529 ntBASIC4.46□□□□□ -1.7
HLA-DPB1P04440 OR52B5P-201ENST00000435337 951 ntBASIC4.46□□□□□ -1.7
HLA-DPB1P04440 TXNP5-201ENST00000441043 315 ntBASIC4.46□□□□□ -1.7
HLA-DPB1P04440 AC245047.2-201ENST00000441060 530 ntBASIC4.46□□□□□ -1.7
HLA-DPB1P04440 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DPB1P04440 OTX2P1-201ENST00000450956 354 ntBASIC4.46□□□□□ -1.7
HLA-DPB1P04440 RPS26P39-201ENST00000469206 341 ntBASIC4.46□□□□□ -1.7
HLA-DPB1P04440 RPS21P4-201ENST00000487122 248 ntBASIC4.46□□□□□ -1.7
HLA-DPB1P04440 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DPB1P04440 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DPB1P04440 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.46□□□□□ -1.7
HLA-DPB1P04440 AC090022.1-201ENST00000546569 311 ntBASIC4.46□□□□□ -1.7
HLA-DPB1P04440 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DPB1P04440 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DPB1P04440 AC004825.1-201ENST00000555068 586 ntBASIC4.46□□□□□ -1.7
HLA-DPB1P04440 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DPB1P04440 AC234775.3-201ENST00000564612 656 ntBASIC4.46□□□□□ -1.7
HLA-DPB1P04440 MIR1269B-201ENST00000580405 75 ntBASIC4.46□□□□□ -1.7
HLA-DPB1P04440 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DPB1P04440 AC087468.1-201ENST00000604365 630 ntBASIC4.46□□□□□ -1.7
HLA-DPB1P04440 AL512329.2-201ENST00000607350 548 ntBASIC4.46□□□□□ -1.7
HLA-DPB1P04440 MIR6826-201ENST00000617808 98 ntBASIC4.46□□□□□ -1.7
HLA-DPB1P04440 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.46□□□□□ -1.7
HLA-DPB1P04440 AL355480.1-201ENST00000629041 99 ntBASIC4.46□□□□□ -1.7
HLA-DPB1P04440 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DPB1P04440 OR52B5P-202ENST00000641118 1110 ntBASIC4.46□□□□□ -1.7
HLA-DPB1P04440 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DPB1P04440 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
HLA-DPB1P04440 AP001273.1-201ENST00000624493 3152 ntBASIC4.46□□□□□ -1.7
HLA-DPB1P04440 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DPB1P04440 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DPB1P04440 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
HLA-DPB1P04440 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.45□□□□□ -1.7
HLA-DPB1P04440 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 AL034370.1-201ENST00000397254 1590 ntBASIC4.45□□□□□ -1.7
HLA-DPB1P04440 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 RNU6-171P-201ENST00000384354 107 ntBASIC4.45□□□□□ -1.7
HLA-DPB1P04440 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 GTF3AP1-201ENST00000416942 1004 ntBASIC4.45□□□□□ -1.7
HLA-DPB1P04440 QRSL1P2-201ENST00000418582 964 ntBASIC4.45□□□□□ -1.7
HLA-DPB1P04440 OR6C71P-201ENST00000432580 913 ntBASIC4.45□□□□□ -1.7
HLA-DPB1P04440 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 Z92846.1-201ENST00000456203 268 ntBASIC4.45□□□□□ -1.7
HLA-DPB1P04440 AC018638.3-201ENST00000461273 132 ntBASIC4.45□□□□□ -1.7
HLA-DPB1P04440 RN7SL443P-201ENST00000464331 290 ntBASIC4.45□□□□□ -1.7
HLA-DPB1P04440 GTF2F2P1-201ENST00000511083 675 ntBASIC4.45□□□□□ -1.7
HLA-DPB1P04440 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 RN7SL753P-201ENST00000581238 290 ntBASIC4.45□□□□□ -1.7
HLA-DPB1P04440 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 AC022960.2-201ENST00000616300 666 ntBASIC4.45□□□□□ -1.7
HLA-DPB1P04440 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 AC012078.1-201ENST00000405035 1646 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms