Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.74□□□□□ -1.17
RAPGEF3O95398 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
RAPGEF3O95398 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RAPGEF3O95398 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC7.73□□□□□ -1.17
RAPGEF3O95398 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC7.73□□□□□ -1.17
RAPGEF3O95398 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RAPGEF3O95398 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RAPGEF3O95398 AC104118.1-201ENST00000607625 1589 ntBASIC7.73□□□□□ -1.17
RAPGEF3O95398 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RAPGEF3O95398 RPL11P3-201ENST00000395256 523 ntBASIC7.73□□□□□ -1.17
RAPGEF3O95398 RN7SKP106-201ENST00000410832 272 ntBASIC7.73□□□□□ -1.17
RAPGEF3O95398 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC7.73□□□□□ -1.17
RAPGEF3O95398 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC7.73□□□□□ -1.17
RAPGEF3O95398 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RAPGEF3O95398 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC7.73□□□□□ -1.17
RAPGEF3O95398 AC005154.2-201ENST00000438110 379 ntBASIC7.73□□□□□ -1.17
RAPGEF3O95398 NPM1P33-201ENST00000438918 872 ntBASIC7.73□□□□□ -1.17
RAPGEF3O95398 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC7.73□□□□□ -1.17
RAPGEF3O95398 OR1H1P-201ENST00000448731 937 ntBASIC7.73□□□□□ -1.17
RAPGEF3O95398 IGHV5-78-201ENST00000450948 295 ntBASIC7.73□□□□□ -1.17
RAPGEF3O95398 AC108729.1-201ENST00000487812 947 ntBASIC7.73□□□□□ -1.17
RAPGEF3O95398 SCARNA20.4-201ENST00000516969 131 ntBASIC7.73□□□□□ -1.17
RAPGEF3O95398 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC7.73□□□□□ -1.17
RAPGEF3O95398 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RAPGEF3O95398 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC7.73□□□□□ -1.17
RAPGEF3O95398 OR5M2P-201ENST00000529003 936 ntBASIC7.73□□□□□ -1.17
RAPGEF3O95398 AC068339.2-201ENST00000534395 618 ntBASIC7.73□□□□□ -1.17
RAPGEF3O95398 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC7.73□□□□□ -1.17
RAPGEF3O95398 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC7.73□□□□□ -1.17
RAPGEF3O95398 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC7.73□□□□□ -1.17
RAPGEF3O95398 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
RAPGEF3O95398 AC133794.1-201ENST00000602731 914 ntBASIC7.73□□□□□ -1.17
RAPGEF3O95398 AL356218.2-201ENST00000605264 187 ntBASIC7.73□□□□□ -1.17
RAPGEF3O95398 AL355802.4-201ENST00000607635 548 ntBASIC7.73□□□□□ -1.17
RAPGEF3O95398 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC7.73□□□□□ -1.17
RAPGEF3O95398 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RAPGEF3O95398 AC110792.3-201ENST00000595906 1614 ntBASIC7.73□□□□□ -1.17
RAPGEF3O95398 ALB-220ENST00000621628 1606 ntTSL 5 BASIC7.73□□□□□ -1.17
RAPGEF3O95398 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RAPGEF3O95398 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.73□□□□□ -1.17
RAPGEF3O95398 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RAPGEF3O95398 CUL4AP1-201ENST00000514750 1863 ntBASIC7.72□□□□□ -1.17
RAPGEF3O95398 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
RAPGEF3O95398 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
RAPGEF3O95398 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
RAPGEF3O95398 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.72□□□□□ -1.17
RAPGEF3O95398 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RAPGEF3O95398 AL731532.1-201ENST00000623972 4236 ntBASIC7.72□□□□□ -1.17
RAPGEF3O95398 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
RAPGEF3O95398 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
RAPGEF3O95398 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.72□□□□□ -1.17
RAPGEF3O95398 AL033543.1-201ENST00000623440 13454 ntBASIC7.72□□□□□ -1.17
RAPGEF3O95398 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RAPGEF3O95398 OR4K15-201ENST00000305051 1216 ntBASIC7.72□□□□□ -1.17
RAPGEF3O95398 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC7.72□□□□□ -1.17
RAPGEF3O95398 SNORA70F-201ENST00000384142 135 ntBASIC7.72□□□□□ -1.17
RAPGEF3O95398 MIR134-201ENST00000385258 73 ntBASIC7.72□□□□□ -1.17
RAPGEF3O95398 OR8V1P-201ENST00000395193 873 ntBASIC7.72□□□□□ -1.17
RAPGEF3O95398 AC073310.1-201ENST00000423226 1033 ntBASIC7.72□□□□□ -1.17
RAPGEF3O95398 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RAPGEF3O95398 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC7.72□□□□□ -1.17
RAPGEF3O95398 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC7.72□□□□□ -1.17
RAPGEF3O95398 SLC25A51P1-201ENST00000468432 871 ntBASIC7.72□□□□□ -1.17
RAPGEF3O95398 SSR3-208ENST00000496050 579 ntTSL 4 BASIC7.72□□□□□ -1.17
RAPGEF3O95398 AC010350.1-201ENST00000504908 231 ntBASIC7.72□□□□□ -1.17
RAPGEF3O95398 AC025674.1-201ENST00000507074 324 ntBASIC7.72□□□□□ -1.17
RAPGEF3O95398 SEC11B-201ENST00000518383 499 ntBASIC7.72□□□□□ -1.17
RAPGEF3O95398 SUMO2P19-201ENST00000518920 295 ntBASIC7.72□□□□□ -1.17
RAPGEF3O95398 VTA1P2-201ENST00000520205 911 ntBASIC7.72□□□□□ -1.17
RAPGEF3O95398 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RAPGEF3O95398 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC7.72□□□□□ -1.17
RAPGEF3O95398 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC7.72□□□□□ -1.17
RAPGEF3O95398 MIR92B-201ENST00000607575 96 ntBASIC7.72□□□□□ -1.17
RAPGEF3O95398 AC244107.2-201ENST00000611773 76 ntBASIC7.72□□□□□ -1.17
RAPGEF3O95398 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC7.72□□□□□ -1.17
RAPGEF3O95398 AL163051.2-201ENST00000618976 735 ntBASIC7.72□□□□□ -1.17
RAPGEF3O95398 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RAPGEF3O95398 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC7.72□□□□□ -1.17
RAPGEF3O95398 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
RAPGEF3O95398 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
RAPGEF3O95398 CNOT6LP1-201ENST00000559681 1462 ntBASIC7.72□□□□□ -1.17
RAPGEF3O95398 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RAPGEF3O95398 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC7.72□□□□□ -1.17
RAPGEF3O95398 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RAPGEF3O95398 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RAPGEF3O95398 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RAPGEF3O95398 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RAPGEF3O95398 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
RAPGEF3O95398 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC7.71□□□□□ -1.17
RAPGEF3O95398 AL137100.1-201ENST00000556703 1620 ntBASIC7.71□□□□□ -1.17
RAPGEF3O95398 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
RAPGEF3O95398 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
RAPGEF3O95398 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
RAPGEF3O95398 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
RAPGEF3O95398 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
RAPGEF3O95398 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC7.71□□□□□ -1.18
RAPGEF3O95398 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
RAPGEF3O95398 IL6-206ENST00000407492 926 ntTSL 3 BASIC7.71□□□□□ -1.18
RAPGEF3O95398 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.71□□□□□ -1.18
RAPGEF3O95398 OR7E125P-201ENST00000443450 846 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms