Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC8.07□□□□□ -1.12
RNF40O75150 SRIP2-201ENST00000428470 166 ntBASIC8.07□□□□□ -1.12
RNF40O75150 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
RNF40O75150 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC8.07□□□□□ -1.12
RNF40O75150 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC8.07□□□□□ -1.12
RNF40O75150 AC231532.1-201ENST00000438584 312 ntBASIC8.07□□□□□ -1.12
RNF40O75150 RPL23AP16-201ENST00000441715 421 ntBASIC8.07□□□□□ -1.12
RNF40O75150 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC8.07□□□□□ -1.12
RNF40O75150 TCEAL4P1-201ENST00000453620 588 ntBASIC8.07□□□□□ -1.12
RNF40O75150 HSPE1P22-201ENST00000456856 327 ntBASIC8.07□□□□□ -1.12
RNF40O75150 ABRACL-202ENST00000461027 456 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RNF40O75150 GLRXP3-201ENST00000470810 321 ntBASIC8.07□□□□□ -1.12
RNF40O75150 AC079594.1-201ENST00000489757 331 ntBASIC8.07□□□□□ -1.12
RNF40O75150 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC8.07□□□□□ -1.12
RNF40O75150 AC112204.1-201ENST00000502591 103 ntBASIC8.07□□□□□ -1.12
RNF40O75150 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC8.07□□□□□ -1.12
RNF40O75150 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC8.07□□□□□ -1.12
RNF40O75150 RNU6-1314P-201ENST00000517139 104 ntBASIC8.07□□□□□ -1.12
RNF40O75150 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC8.07□□□□□ -1.12
RNF40O75150 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC8.07□□□□□ -1.12
RNF40O75150 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC8.07□□□□□ -1.12
RNF40O75150 AP001189.2-201ENST00000527320 189 ntBASIC8.07□□□□□ -1.12
RNF40O75150 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC8.07□□□□□ -1.12
RNF40O75150 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
RNF40O75150 NPIPP1-203ENST00000547107 1071 ntBASIC8.07□□□□□ -1.12
RNF40O75150 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC8.07□□□□□ -1.12
RNF40O75150 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC8.07□□□□□ -1.12
RNF40O75150 AC092868.1-201ENST00000557949 802 ntBASIC8.07□□□□□ -1.12
RNF40O75150 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC8.07□□□□□ -1.12
RNF40O75150 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RNF40O75150 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC8.07□□□□□ -1.12
RNF40O75150 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
RNF40O75150 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC8.07□□□□□ -1.12
RNF40O75150 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC8.07□□□□□ -1.12
RNF40O75150 HNRNPA1P67-201ENST00000604027 926 ntBASIC8.07□□□□□ -1.12
RNF40O75150 AC007938.3-201ENST00000604965 623 ntBASIC8.07□□□□□ -1.12
RNF40O75150 AP000654.2-201ENST00000605633 586 ntBASIC8.07□□□□□ -1.12
RNF40O75150 AC006924.1-201ENST00000610750 559 ntBASIC8.07□□□□□ -1.12
RNF40O75150 uc_338.22-201ENST00000622722 187 ntBASIC8.07□□□□□ -1.12
RNF40O75150 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC8.07□□□□□ -1.12
RNF40O75150 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC8.07□□□□□ -1.12
RNF40O75150 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RNF40O75150 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
RNF40O75150 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
RNF40O75150 AC107980.1-201ENST00000558671 3355 ntBASIC8.07□□□□□ -1.12
RNF40O75150 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RNF40O75150 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC8.07□□□□□ -1.12
RNF40O75150 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC8.07□□□□□ -1.12
RNF40O75150 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RNF40O75150 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RNF40O75150 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RNF40O75150 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RNF40O75150 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RNF40O75150 AC090771.1-201ENST00000585803 1618 ntBASIC8.07□□□□□ -1.12
RNF40O75150 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RNF40O75150 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
RNF40O75150 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
RNF40O75150 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RNF40O75150 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RNF40O75150 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
RNF40O75150 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC8.06□□□□□ -1.12
RNF40O75150 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RNF40O75150 OFD1P10Y-201ENST00000434110 1433 ntBASIC8.06□□□□□ -1.12
RNF40O75150 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
RNF40O75150 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RNF40O75150 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
RNF40O75150 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RNF40O75150 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RNF40O75150 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RNF40O75150 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RNF40O75150 Y_RNA.28-201ENST00000362554 111 ntBASIC8.06□□□□□ -1.12
RNF40O75150 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC8.06□□□□□ -1.12
RNF40O75150 CUBN-201ENST00000377823 705 ntTSL 3 BASIC8.06□□□□□ -1.12
RNF40O75150 SUGT1P1-201ENST00000379514 476 ntBASIC8.06□□□□□ -1.12
RNF40O75150 RPL7-203ENST00000396466 762 ntTSL 3 BASIC8.06□□□□□ -1.12
RNF40O75150 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC8.06□□□□□ -1.12
RNF40O75150 RN7SKP236-201ENST00000410635 284 ntBASIC8.06□□□□□ -1.12
RNF40O75150 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC8.06□□□□□ -1.12
RNF40O75150 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC8.06□□□□□ -1.12
RNF40O75150 TMBIM7P-201ENST00000418074 855 ntBASIC8.06□□□□□ -1.12
RNF40O75150 AL022100.1-202ENST00000421214 548 ntBASIC8.06□□□□□ -1.12
RNF40O75150 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RNF40O75150 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC8.06□□□□□ -1.12
RNF40O75150 AC007559.1-201ENST00000428736 355 ntBASIC8.06□□□□□ -1.12
RNF40O75150 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC8.06□□□□□ -1.12
RNF40O75150 AL606489.2-201ENST00000433886 234 ntBASIC8.06□□□□□ -1.12
RNF40O75150 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC8.06□□□□□ -1.12
RNF40O75150 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RNF40O75150 SKP1P1-201ENST00000438081 489 ntBASIC8.06□□□□□ -1.12
RNF40O75150 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC8.06□□□□□ -1.12
RNF40O75150 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC8.06□□□□□ -1.12
RNF40O75150 AC104634.1-201ENST00000452720 462 ntBASIC8.06□□□□□ -1.12
RNF40O75150 AC103563.5-201ENST00000455643 364 ntBASIC8.06□□□□□ -1.12
RNF40O75150 AC010307.1-201ENST00000467206 836 ntBASIC8.06□□□□□ -1.12
RNF40O75150 RPL34P33-201ENST00000486062 334 ntBASIC8.06□□□□□ -1.12
RNF40O75150 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC8.06□□□□□ -1.12
RNF40O75150 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC8.06□□□□□ -1.12
RNF40O75150 PCBP2P3-201ENST00000509726 843 ntBASIC8.06□□□□□ -1.12
RNF40O75150 RNU4-49P-201ENST00000516080 140 ntBASIC8.06□□□□□ -1.12
RNF40O75150 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms