Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.62□□□□□ -1.51
PROM1O43490 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.62□□□□□ -1.51
PROM1O43490 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PROM1O43490 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.62□□□□□ -1.51
PROM1O43490 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PROM1O43490 NPM1P42-201ENST00000560329 862 ntBASIC5.62□□□□□ -1.51
PROM1O43490 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PROM1O43490 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.62□□□□□ -1.51
PROM1O43490 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.62□□□□□ -1.51
PROM1O43490 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.62□□□□□ -1.51
PROM1O43490 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.62□□□□□ -1.51
PROM1O43490 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.62□□□□□ -1.51
PROM1O43490 MIR6809-201ENST00000612189 116 ntBASIC5.62□□□□□ -1.51
PROM1O43490 AC009318.3-201ENST00000616916 503 ntBASIC5.62□□□□□ -1.51
PROM1O43490 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.62□□□□□ -1.51
PROM1O43490 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.62□□□□□ -1.51
PROM1O43490 AC105105.5-201ENST00000622635 1294 ntBASIC5.62□□□□□ -1.51
PROM1O43490 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.62□□□□□ -1.51
PROM1O43490 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
PROM1O43490 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PROM1O43490 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.62□□□□□ -1.51
PROM1O43490 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.62□□□□□ -1.51
PROM1O43490 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.62□□□□□ -1.51
PROM1O43490 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PROM1O43490 ZNF876P-202ENST00000398732 1485 ntBASIC5.62□□□□□ -1.51
PROM1O43490 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PROM1O43490 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PROM1O43490 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PROM1O43490 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PROM1O43490 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.62□□□□□ -1.51
PROM1O43490 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PROM1O43490 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PROM1O43490 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.62□□□□□ -1.51
PROM1O43490 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PROM1O43490 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.61□□□□□ -1.51
PROM1O43490 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PROM1O43490 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PROM1O43490 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PROM1O43490 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PROM1O43490 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PROM1O43490 SELENOWP1-201ENST00000322792 252 ntBASIC5.61□□□□□ -1.51
PROM1O43490 SNORD56.4-201ENST00000363883 71 ntBASIC5.61□□□□□ -1.51
PROM1O43490 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PROM1O43490 RNU6-1242P-201ENST00000391052 103 ntBASIC5.61□□□□□ -1.51
PROM1O43490 RNA5SP105-201ENST00000391123 113 ntBASIC5.61□□□□□ -1.51
PROM1O43490 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PROM1O43490 AL031985.1-201ENST00000392713 418 ntBASIC5.61□□□□□ -1.51
PROM1O43490 AL356317.1-201ENST00000396110 1436 ntBASIC5.61□□□□□ -1.51
PROM1O43490 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.61□□□□□ -1.51
PROM1O43490 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
PROM1O43490 AL021331.1-201ENST00000402817 582 ntBASIC5.61□□□□□ -1.51
PROM1O43490 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PROM1O43490 Z98755.1-201ENST00000407015 1384 ntBASIC5.61□□□□□ -1.51
PROM1O43490 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.61□□□□□ -1.51
PROM1O43490 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.61□□□□□ -1.51
PROM1O43490 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.61□□□□□ -1.51
PROM1O43490 CHEK2P5-201ENST00000423877 246 ntBASIC5.61□□□□□ -1.51
PROM1O43490 VTI1BP4-201ENST00000427516 527 ntBASIC5.61□□□□□ -1.51
PROM1O43490 RPS3AP38-201ENST00000435889 763 ntBASIC5.61□□□□□ -1.51
PROM1O43490 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PROM1O43490 THAP5P1-201ENST00000439089 262 ntBASIC5.61□□□□□ -1.51
PROM1O43490 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.61□□□□□ -1.51
PROM1O43490 AC000041.1-201ENST00000439655 175 ntBASIC5.61□□□□□ -1.51
PROM1O43490 AC073052.1-201ENST00000440417 714 ntBASIC5.61□□□□□ -1.51
PROM1O43490 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.61□□□□□ -1.51
PROM1O43490 AL096803.2-201ENST00000450032 677 ntBASIC5.61□□□□□ -1.51
PROM1O43490 GEMIN2P1-201ENST00000454246 752 ntBASIC5.61□□□□□ -1.51
PROM1O43490 RPL7P45-201ENST00000455851 743 ntBASIC5.61□□□□□ -1.51
PROM1O43490 RN7SL174P-201ENST00000475578 289 ntBASIC5.61□□□□□ -1.51
PROM1O43490 PFN1P6-201ENST00000476786 399 ntBASIC5.61□□□□□ -1.51
PROM1O43490 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.61□□□□□ -1.51
PROM1O43490 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.61□□□□□ -1.51
PROM1O43490 AC079203.1-201ENST00000487972 404 ntBASIC5.61□□□□□ -1.51
PROM1O43490 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.61□□□□□ -1.51
PROM1O43490 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.61□□□□□ -1.51
PROM1O43490 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.61□□□□□ -1.51
PROM1O43490 AC021146.7-201ENST00000509604 775 ntBASIC5.61□□□□□ -1.51
PROM1O43490 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
PROM1O43490 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.61□□□□□ -1.51
PROM1O43490 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.61□□□□□ -1.51
PROM1O43490 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PROM1O43490 AC090819.1-201ENST00000523800 1111 ntBASIC5.61□□□□□ -1.51
PROM1O43490 AP003396.4-201ENST00000527574 265 ntBASIC5.61□□□□□ -1.51
PROM1O43490 AC079064.1-201ENST00000528365 362 ntBASIC5.61□□□□□ -1.51
PROM1O43490 AP003717.3-201ENST00000544832 1180 ntBASIC5.61□□□□□ -1.51
PROM1O43490 AC007956.1-201ENST00000555623 542 ntBASIC5.61□□□□□ -1.51
PROM1O43490 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.61□□□□□ -1.51
PROM1O43490 CYCSP38-201ENST00000559840 322 ntBASIC5.61□□□□□ -1.51
PROM1O43490 AC122134.1-201ENST00000565664 1104 ntBASIC5.61□□□□□ -1.51
PROM1O43490 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.61□□□□□ -1.51
PROM1O43490 MIR4789-201ENST00000577469 82 ntBASIC5.61□□□□□ -1.51
PROM1O43490 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.61□□□□□ -1.51
PROM1O43490 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.61□□□□□ -1.51
PROM1O43490 AC005224.3-201ENST00000584683 2140 ntBASIC5.61□□□□□ -1.51
PROM1O43490 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.61□□□□□ -1.51
PROM1O43490 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.61□□□□□ -1.51
PROM1O43490 BMS1P7-201ENST00000602440 1052 ntBASIC5.61□□□□□ -1.51
PROM1O43490 AL133507.1-201ENST00000605269 557 ntBASIC5.61□□□□□ -1.51
PROM1O43490 AL136131.3-201ENST00000607600 188 ntBASIC5.61□□□□□ -1.51
PROM1O43490 AC108673.3-201ENST00000609183 335 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms