Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RGPD3A6NKT7 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 AL158827.1-201ENST00000416300 391 ntBASIC6.16□□□□□ -1.42
RGPD3A6NKT7 VN1R34P-201ENST00000447387 883 ntBASIC6.16□□□□□ -1.42
RGPD3A6NKT7 AL358232.1-201ENST00000448030 501 ntBASIC6.16□□□□□ -1.42
RGPD3A6NKT7 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 AL023881.1-201ENST00000621088 301 ntBASIC6.16□□□□□ -1.42
RGPD3A6NKT7 RNF123-214ENST00000629802 207 ntTSL 5 BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.16□□□□□ -1.42
RGPD3A6NKT7 OR51H2P-202ENST00000641424 3046 ntBASIC6.16□□□□□ -1.42
RGPD3A6NKT7 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 LRRC37BP1-201ENST00000398851 714 ntBASIC6.16□□□□□ -1.42
RGPD3A6NKT7 AL390316.1-201ENST00000406279 553 ntBASIC6.16□□□□□ -1.42
RGPD3A6NKT7 AC009238.2-201ENST00000431026 355 ntBASIC6.16□□□□□ -1.42
RGPD3A6NKT7 AL132765.1-201ENST00000434165 553 ntBASIC6.16□□□□□ -1.42
RGPD3A6NKT7 RNU1-45P-201ENST00000517191 141 ntBASIC6.16□□□□□ -1.42
RGPD3A6NKT7 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 AC011477.5-201ENST00000586571 259 ntBASIC6.16□□□□□ -1.42
RGPD3A6NKT7 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RGPD3A6NKT7 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.42
RGPD3A6NKT7 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RGPD3A6NKT7 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
RGPD3A6NKT7 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RGPD3A6NKT7 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
RGPD3A6NKT7 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
RGPD3A6NKT7 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
RGPD3A6NKT7 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RGPD3A6NKT7 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.15□□□□□ -1.42
RGPD3A6NKT7 RN7SKP185-201ENST00000362813 326 ntBASIC6.15□□□□□ -1.43
RGPD3A6NKT7 SNORA11.2-201ENST00000408318 127 ntBASIC6.15□□□□□ -1.43
RGPD3A6NKT7 AC140479.3-201ENST00000418944 1126 ntBASIC6.15□□□□□ -1.43
RGPD3A6NKT7 AC017019.1-201ENST00000426129 261 ntBASIC6.15□□□□□ -1.43
RGPD3A6NKT7 SCAND3P1-201ENST00000439854 1060 ntBASIC6.15□□□□□ -1.43
RGPD3A6NKT7 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.15□□□□□ -1.43
RGPD3A6NKT7 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC6.15□□□□□ -1.43
RGPD3A6NKT7 IGBP1P4-201ENST00000503202 879 ntBASIC6.15□□□□□ -1.43
RGPD3A6NKT7 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.15□□□□□ -1.43
RGPD3A6NKT7 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC6.15□□□□□ -1.43
RGPD3A6NKT7 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC6.15□□□□□ -1.43
RGPD3A6NKT7 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC6.15□□□□□ -1.43
RGPD3A6NKT7 AC022916.3-201ENST00000592961 742 ntBASIC6.15□□□□□ -1.43
RGPD3A6NKT7 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.15□□□□□ -1.43
RGPD3A6NKT7 AC010480.1-201ENST00000624823 684 ntBASIC6.15□□□□□ -1.43
RGPD3A6NKT7 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
RGPD3A6NKT7 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RGPD3A6NKT7 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.15□□□□□ -1.43
RGPD3A6NKT7 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
RGPD3A6NKT7 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RGPD3A6NKT7 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RGPD3A6NKT7 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
RGPD3A6NKT7 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RGPD3A6NKT7 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RGPD3A6NKT7 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
RGPD3A6NKT7 SNX18P3-202ENST00000565670 1750 ntBASIC6.15□□□□□ -1.43
RGPD3A6NKT7 MAPK10-270ENST00000641102 3538 ntBASIC6.14□□□□□ -1.43
RGPD3A6NKT7 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RGPD3A6NKT7 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RGPD3A6NKT7 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RGPD3A6NKT7 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RGPD3A6NKT7 TRAV35-201ENST00000390462 330 ntBASIC6.14□□□□□ -1.43
RGPD3A6NKT7 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RGPD3A6NKT7 AC011933.1-201ENST00000413334 321 ntBASIC6.14□□□□□ -1.43
RGPD3A6NKT7 AC116533.1-201ENST00000459748 321 ntBASIC6.14□□□□□ -1.43
RGPD3A6NKT7 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.14□□□□□ -1.43
RGPD3A6NKT7 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC6.14□□□□□ -1.43
RGPD3A6NKT7 MTND4LP2-201ENST00000502312 285 ntBASIC6.14□□□□□ -1.43
RGPD3A6NKT7 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6.14□□□□□ -1.43
RGPD3A6NKT7 OR8Q1P-201ENST00000526467 655 ntBASIC6.14□□□□□ -1.43
RGPD3A6NKT7 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RGPD3A6NKT7 RN7SL703P-201ENST00000578485 302 ntBASIC6.14□□□□□ -1.43
RGPD3A6NKT7 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.14□□□□□ -1.43
RGPD3A6NKT7 AC099676.1-201ENST00000608886 657 ntBASIC6.14□□□□□ -1.43
RGPD3A6NKT7 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC6.14□□□□□ -1.43
RGPD3A6NKT7 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.14□□□□□ -1.43
RGPD3A6NKT7 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms