Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AP001357.1-201ENST00000586304 1053 ntBASIC5.24□□□□□ -1.57
PCDHGA1Q9Y5H4 AC025857.2-201ENST00000602711 238 ntBASIC5.24□□□□□ -1.57
PCDHGA1Q9Y5H4 AC019080.5-201ENST00000624891 757 ntBASIC5.24□□□□□ -1.57
PCDHGA1Q9Y5H4 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDHGA1Q9Y5H4 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHGA1Q9Y5H4 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHGA1Q9Y5H4 HSPA8P17-201ENST00000427029 1382 ntBASIC5.24□□□□□ -1.57
PCDHGA1Q9Y5H4 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDHGA1Q9Y5H4 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHGA1Q9Y5H4 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHGA1Q9Y5H4 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHGA1Q9Y5H4 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHGA1Q9Y5H4 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHGA1Q9Y5H4 KYNUP3-201ENST00000574386 1341 ntBASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 AC026951.1-201ENST00000559530 2459 ntBASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 MT-TP-201ENST00000387461 68 ntBASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 RNA5SP91-201ENST00000390902 119 ntBASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 AL445528.1-201ENST00000426330 420 ntBASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 TMEM183AP1-205ENST00000432739 290 ntBASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 NDUFA5P1-201ENST00000433858 341 ntBASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 AC073410.1-201ENST00000435125 589 ntBASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 AC090602.1-201ENST00000469695 252 ntBASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 AC037198.2-201ENST00000478845 733 ntBASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 NPM1P28-201ENST00000492269 840 ntBASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 TOMM22P4-201ENST00000511318 336 ntBASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 AC110775.1-201ENST00000513721 462 ntBASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 ACTR6P1-201ENST00000514311 1104 ntBASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 AC136777.2-201ENST00000522979 358 ntBASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 NPM1P42-201ENST00000560329 862 ntBASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 MIR4330-201ENST00000579077 105 ntBASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 DHFRP1-201ENST00000579682 559 ntBASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 ELOCP28-201ENST00000590044 317 ntBASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 AL513327.3-201ENST00000602618 469 ntBASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 AC096553.1-201ENST00000605169 829 ntBASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 AC021106.3-201ENST00000623925 531 ntBASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 AC104820.1-201ENST00000624183 307 ntBASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
PCDHGA1Q9Y5H4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 AC093591.2-201ENST00000565254 3843 ntBASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 AL078599.1-201ENST00000402075 293 ntBASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 GSTA12P-201ENST00000402398 508 ntBASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 RPS4XP9-201ENST00000405151 780 ntBASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 AMZ2P2-201ENST00000406819 1057 ntBASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 RN7SKP126-201ENST00000411143 300 ntBASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 RAB28P1-201ENST00000411517 641 ntBASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 AL356806.1-201ENST00000422524 916 ntBASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 AC104837.2-201ENST00000427236 424 ntBASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 USP9YP9-201ENST00000429406 715 ntBASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 AC022022.1-201ENST00000430304 178 ntBASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 AL606490.7-201ENST00000433136 191 ntBASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 USP24P1-201ENST00000433802 779 ntBASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 AP000936.3-201ENST00000438127 255 ntBASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 RPL21P133-201ENST00000443666 476 ntBASIC5.22□□□□□ -1.57
PCDHGA1Q9Y5H4 AL589765.3-201ENST00000446084 462 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms