Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 AC093278.2-201ENST00000564956 2485 ntBASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 SELE-203ENST00000367775 3389 ntTSL 5 BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 JPX-212ENST00000639185 9658 ntTSL 5 BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 COG2-209ENST00000534989 2963 ntTSL 2 BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 AC104581.5-201ENST00000624171 7141 ntBASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 AC007406.5-201ENST00000570140 3170 ntBASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PDZRN3Q9UPQ7 AL136531.3-201ENST00000624378 3658 ntBASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 TMCC1P1-201ENST00000518897 1980 ntBASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 AC083806.2-201ENST00000617795 2685 ntBASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 OR56B2P-201ENST00000317102 954 ntBASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 Y_RNA.133-201ENST00000363428 110 ntBASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 RNU6-236P-201ENST00000363886 106 ntBASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 AP000357.1-201ENST00000409926 1165 ntBASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 AL158825.1-201ENST00000414735 521 ntBASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 HSPE1P28-201ENST00000443139 211 ntBASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 FAM172BP-201ENST00000487497 1089 ntBASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 RN7SL362P-201ENST00000494228 267 ntBASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 SEPT10P1-201ENST00000517342 1162 ntBASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 OR7K1P-201ENST00000546439 926 ntBASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 OR1E3-201ENST00000575608 948 ntBASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 RN7SL753P-201ENST00000581238 290 ntBASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 MYLK-221ENST00000583087 678 ntTSL 4 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 AC005377.1-201ENST00000605126 456 ntBASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 BX323046.1-201ENST00000610145 535 ntBASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 AL135999.3-201ENST00000610501 812 ntBASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 AC026951.2-201ENST00000613847 241 ntBASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 AC073348.1-201ENST00000623002 331 ntBASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 AC120057.5-201ENST00000623840 154 ntBASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 CA10-204ENST00000570565 2276 ntTSL 5 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 CYP2G2P-201ENST00000594920 1485 ntBASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 AL596244.1-201ENST00000567068 3779 ntBASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PDZRN3Q9UPQ7 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 PSMA6P1-201ENST00000400275 741 ntBASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 PRELID1P1-201ENST00000403549 660 ntBASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 AL356776.1-201ENST00000406574 447 ntBASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 RNA5SP115-201ENST00000411160 107 ntBASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 AL009174.1-201ENST00000426577 416 ntBASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC8.61□□□□□ -1.03
PDZRN3Q9UPQ7 FGF7P3-201ENST00000454645 303 ntBASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms