Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AC009784.1-201ENST00000426484 460 ntBASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AL627308.1-201ENST00000435693 821 ntBASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AC006335.2-201ENST00000437993 330 ntBASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AL359265.1-201ENST00000440296 795 ntBASIC5.72□□□□□ -1.49
USP29Q9HBJ7 SNRPFP2-201ENST00000440710 251 ntBASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 GAPDHP14-201ENST00000450472 937 ntBASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 RPL23AP23-201ENST00000452590 471 ntBASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AL139824.2-201ENST00000458731 1095 ntBASIC5.72□□□□□ -1.49
USP29Q9HBJ7 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AC068587.2-201ENST00000478386 781 ntBASIC5.72□□□□□ -1.49
USP29Q9HBJ7 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 RPSAP51-201ENST00000497462 645 ntBASIC5.72□□□□□ -1.49
USP29Q9HBJ7 PPM1AP1-201ENST00000502740 1135 ntBASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AC091912.1-201ENST00000511351 248 ntBASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 RNU6-615P-201ENST00000516065 106 ntBASIC5.72□□□□□ -1.49
USP29Q9HBJ7 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AL049872.1-201ENST00000556323 322 ntBASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AC025918.2-201ENST00000558683 763 ntBASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AC016180.1-201ENST00000567945 403 ntBASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AC011492.1-201ENST00000600023 315 ntBASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AL022394.1-201ENST00000606979 292 ntBASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AC079395.2-201ENST00000610982 737 ntBASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AC025574.2-201ENST00000615621 514 ntBASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AC068787.1-201ENST00000623908 691 ntBASIC5.72□□□□□ -1.49
USP29Q9HBJ7 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AL121839.2-201ENST00000565058 6943 ntBASIC5.71□□□□□ -1.49
USP29Q9HBJ7 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.71□□□□□ -1.49
USP29Q9HBJ7 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
USP29Q9HBJ7 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.71□□□□□ -1.49
USP29Q9HBJ7 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.49
USP29Q9HBJ7 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
USP29Q9HBJ7 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 AC002525.1-201ENST00000624392 1622 ntBASIC5.71□□□□□ -1.5
USP29Q9HBJ7 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 RNU6-354P-201ENST00000383862 107 ntBASIC5.71□□□□□ -1.5
USP29Q9HBJ7 RNU6-610P-201ENST00000384264 107 ntBASIC5.71□□□□□ -1.5
USP29Q9HBJ7 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.71□□□□□ -1.5
USP29Q9HBJ7 MIR1178-201ENST00000408396 91 ntBASIC5.71□□□□□ -1.5
USP29Q9HBJ7 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 RPSAP35-201ENST00000413753 818 ntBASIC5.71□□□□□ -1.5
USP29Q9HBJ7 AC079809.1-201ENST00000415468 276 ntBASIC5.71□□□□□ -1.5
USP29Q9HBJ7 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 TNPO1P1-201ENST00000423641 1138 ntBASIC5.71□□□□□ -1.5
USP29Q9HBJ7 VN1R42P-201ENST00000424651 344 ntBASIC5.71□□□□□ -1.5
USP29Q9HBJ7 RPL7P56-201ENST00000429441 717 ntBASIC5.71□□□□□ -1.5
USP29Q9HBJ7 BX119904.1-201ENST00000432026 348 ntBASIC5.71□□□□□ -1.5
USP29Q9HBJ7 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.71□□□□□ -1.5
USP29Q9HBJ7 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 AC008379.1-201ENST00000463655 464 ntBASIC5.71□□□□□ -1.5
USP29Q9HBJ7 RN7SL188P-201ENST00000469842 285 ntBASIC5.71□□□□□ -1.5
USP29Q9HBJ7 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 CYCSP20-201ENST00000473154 315 ntBASIC5.71□□□□□ -1.5
USP29Q9HBJ7 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 AC112518.2-201ENST00000508565 425 ntBASIC5.71□□□□□ -1.5
USP29Q9HBJ7 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 AC010476.1-201ENST00000519111 851 ntBASIC5.71□□□□□ -1.5
USP29Q9HBJ7 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 MIR4660-201ENST00000583549 74 ntBASIC5.71□□□□□ -1.5
USP29Q9HBJ7 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms