Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 AC093909.5-201ENST00000621839 1799 ntBASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 MIR105-1-201ENST00000385222 81 ntBASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 MIR921-201ENST00000401133 56 ntBASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 MTND3P20-201ENST00000407663 186 ntBASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 HMGN1P20-201ENST00000411849 300 ntBASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 AL139158.1-201ENST00000424719 340 ntBASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 AC118758.1-202ENST00000454719 225 ntBASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 HMGB1P4-201ENST00000455362 567 ntBASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 RPL23AP65-201ENST00000475608 468 ntBASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 AC098818.1-201ENST00000478593 252 ntBASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 LSM3P4-201ENST00000502948 309 ntBASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 AC012400.1-201ENST00000518452 381 ntBASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 AC125612.1-201ENST00000547580 377 ntBASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 AC022387.2-201ENST00000604050 448 ntBASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 AC087783.2-201ENST00000605070 562 ntBASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 COX6CP4-201ENST00000605798 228 ntBASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 AC239803.2-201ENST00000610161 430 ntBASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 AP001002.1-201ENST00000625148 1513 ntBASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 SAMMSON-213ENST00000641336 1521 ntBASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
VIPAS39Q9H9C1 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 AC027279.1-201ENST00000568885 4284 ntBASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 IRF5P1-201ENST00000504852 2164 ntBASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 NAMPTP1-201ENST00000440465 2514 ntBASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 AL353625.1-202ENST00000366273 571 ntBASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 NPM1P10-201ENST00000398310 865 ntBASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 RNU2-22P-201ENST00000411266 212 ntBASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 Z93019.1-201ENST00000416450 973 ntBASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 AC004938.1-201ENST00000438468 308 ntBASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 MTND3P4-201ENST00000453537 303 ntBASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 RN7SL443P-201ENST00000464331 290 ntBASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 RNA5SP392-201ENST00000516905 112 ntBASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 AC087477.6-201ENST00000559595 843 ntBASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 ARGFXP2-201ENST00000579304 949 ntBASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.11□□□□□ -1.59
VIPAS39Q9H9C1 SNX18P1Y-201ENST00000616231 511 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms