Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LRCH3Q96II8 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LRCH3Q96II8 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LRCH3Q96II8 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 AC087501.5-201ENST00000607496 2374 ntBASIC8.05□□□□□ -1.12
LRCH3Q96II8 MTCO1P25-201ENST00000414449 1799 ntBASIC8.05□□□□□ -1.12
LRCH3Q96II8 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
LRCH3Q96II8 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LRCH3Q96II8 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LRCH3Q96II8 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LRCH3Q96II8 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 Y_RNA.135-201ENST00000363439 95 ntBASIC8.05□□□□□ -1.12
LRCH3Q96II8 Y_RNA.187-201ENST00000363918 113 ntBASIC8.05□□□□□ -1.12
LRCH3Q96II8 SNORA70.5-201ENST00000365519 135 ntBASIC8.05□□□□□ -1.12
LRCH3Q96II8 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 NFIB-202ENST00000380924 840 ntTSL 5 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 RNU6-26P-201ENST00000383985 107 ntBASIC8.05□□□□□ -1.12
LRCH3Q96II8 FGFR1OP2P1-201ENST00000395943 500 ntBASIC8.05□□□□□ -1.12
LRCH3Q96II8 AL121834.1-202ENST00000404494 277 ntBASIC8.05□□□□□ -1.12
LRCH3Q96II8 MAST4-207ENST00000407621 559 ntTSL 2 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 RNU6-1304P-201ENST00000411374 106 ntBASIC8.05□□□□□ -1.12
LRCH3Q96II8 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 TMBIM7P-201ENST00000418074 855 ntBASIC8.05□□□□□ -1.12
LRCH3Q96II8 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 ATP5A1P8-201ENST00000423669 1291 ntBASIC8.05□□□□□ -1.12
LRCH3Q96II8 AP000997.1-201ENST00000424313 479 ntTSL 3 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LRCH3Q96II8 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 DUBR-205ENST00000495228 411 ntTSL 2 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 RN7SKP295-201ENST00000517264 153 ntBASIC8.05□□□□□ -1.12
LRCH3Q96II8 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 AC009902.1-201ENST00000519351 183 ntBASIC8.05□□□□□ -1.12
LRCH3Q96II8 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 SLC2A13P1-201ENST00000531560 322 ntBASIC8.05□□□□□ -1.12
LRCH3Q96II8 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 AL031846.1-201ENST00000560933 314 ntBASIC8.05□□□□□ -1.12
LRCH3Q96II8 AL359999.1-201ENST00000604513 294 ntBASIC8.05□□□□□ -1.12
LRCH3Q96II8 AC008966.2-201ENST00000606157 453 ntBASIC8.05□□□□□ -1.12
LRCH3Q96II8 AC097468.3-201ENST00000607956 456 ntBASIC8.05□□□□□ -1.12
LRCH3Q96II8 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 AC078899.5-201ENST00000612475 178 ntBASIC8.05□□□□□ -1.12
LRCH3Q96II8 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 RPL23AP61-201ENST00000623642 466 ntBASIC8.05□□□□□ -1.12
LRCH3Q96II8 AC099654.6-201ENST00000636487 512 ntBASIC8.05□□□□□ -1.12
LRCH3Q96II8 U6.107-201ENST00000637108 79 ntBASIC8.05□□□□□ -1.12
LRCH3Q96II8 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LRCH3Q96II8 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
LRCH3Q96II8 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LRCH3Q96II8 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LRCH3Q96II8 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 SORCS1-202ENST00000344440 3009 ntTSL 5 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 AC025574.1-201ENST00000554784 1653 ntBASIC8.05□□□□□ -1.12
LRCH3Q96II8 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LRCH3Q96II8 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LRCH3Q96II8 AL031123.2-201ENST00000563225 3325 ntBASIC8.04□□□□□ -1.12
LRCH3Q96II8 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LRCH3Q96II8 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC8.04□□□□□ -1.12
LRCH3Q96II8 RIOK3P1-201ENST00000418778 1528 ntBASIC8.04□□□□□ -1.12
LRCH3Q96II8 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LRCH3Q96II8 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
LRCH3Q96II8 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LRCH3Q96II8 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
LRCH3Q96II8 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
LRCH3Q96II8 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LRCH3Q96II8 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LRCH3Q96II8 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 TMSB4XP2-201ENST00000335179 210 ntBASIC8.04□□□□□ -1.12
LRCH3Q96II8 FAM32BP-201ENST00000344033 333 ntBASIC8.04□□□□□ -1.12
LRCH3Q96II8 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 Y_RNA.112-201ENST00000363250 102 ntBASIC8.04□□□□□ -1.12
LRCH3Q96II8 RN7SKP36-201ENST00000363997 312 ntBASIC8.04□□□□□ -1.12
LRCH3Q96II8 U3.31-201ENST00000408113 216 ntBASIC8.04□□□□□ -1.12
LRCH3Q96II8 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 IGKV1OR9-1-201ENST00000424370 284 ntBASIC8.04□□□□□ -1.12
LRCH3Q96II8 AC073335.1-201ENST00000427776 363 ntBASIC8.04□□□□□ -1.12
LRCH3Q96II8 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 RPS3AP52-201ENST00000435639 297 ntBASIC8.04□□□□□ -1.12
LRCH3Q96II8 AC093166.3-201ENST00000448785 303 ntBASIC8.04□□□□□ -1.12
LRCH3Q96II8 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 Y_RNA.635-201ENST00000459041 101 ntBASIC8.04□□□□□ -1.12
LRCH3Q96II8 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms