Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC010740.1-201ENST00000417035 684 ntBASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 RPS26P13-201ENST00000419030 330 ntBASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 AC006455.6-201ENST00000426192 893 ntBASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 NPM1P22-201ENST00000427761 952 ntBASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 RPL7P11-201ENST00000437586 658 ntBASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 TXNP5-201ENST00000441043 315 ntBASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 OTX2P1-201ENST00000450956 354 ntBASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 RPL7P61-201ENST00000451721 751 ntBASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 OR11I1P-201ENST00000486033 954 ntBASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 AC231760.1-201ENST00000498002 260 ntBASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 AC140172.1-201ENST00000502928 141 ntBASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 KATNBL1P4-201ENST00000503545 918 ntBASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 AC008033.2-201ENST00000542626 177 ntBASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 DPRXP4-201ENST00000578053 568 ntBASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 AC005377.1-201ENST00000605126 456 ntBASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ECHDC3Q96DC8 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 AC131971.1-201ENST00000332881 1482 ntBASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 LRRC37BP1-201ENST00000398851 714 ntBASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 AL136116.2-201ENST00000404020 785 ntBASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 CHEK2P3-201ENST00000416118 248 ntBASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 HSPE1P16-201ENST00000426640 348 ntBASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 RPL12P3-201ENST00000440080 396 ntBASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 AL137845.2-201ENST00000444292 988 ntBASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 HIGD1AP8-201ENST00000453927 274 ntBASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 RN7SL610P-201ENST00000463845 291 ntBASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 OR2A3P-201ENST00000493774 953 ntBASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 MRPS33P2-201ENST00000507850 322 ntBASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 NDUFB5P1-201ENST00000508134 564 ntBASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 AL358913.1-201ENST00000554342 121 ntBASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 AC010547.7-201ENST00000570323 333 ntBASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 AC011840.5-201ENST00000582125 771 ntBASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 MIR4443-201ENST00000585052 53 ntBASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 AC010503.3-201ENST00000594355 540 ntBASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 AC015813.6-201ENST00000624409 5808 ntBASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 AC092376.2-201ENST00000622621 4116 ntBASIC5.03□□□□□ -1.6
ECHDC3Q96DC8 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 MTCO1P15-201ENST00000529569 1526 ntBASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 TTC39DP-201ENST00000416781 1688 ntBASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms