Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 CST13P-201ENST00000376992 428 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 SNORA68-201ENST00000384437 133 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 RNA5SP185-201ENST00000390963 114 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 RPS20P2-201ENST00000402520 389 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 AL590004.1-201ENST00000405321 300 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 RANP6-201ENST00000413691 644 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 AC234782.4-201ENST00000417646 1048 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 RAD23BP1-201ENST00000421404 1227 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 RPL23AP34-201ENST00000423483 410 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 RPL19P21-201ENST00000424919 591 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 OR51AB1P-201ENST00000429046 620 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 AL645936.2-201ENST00000430565 928 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 NDUFA5P4-201ENST00000436704 385 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 SEPT14P3-201ENST00000439401 183 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 AL732372.2-207ENST00000445840 183 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 SEPT14P2-201ENST00000453405 183 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 RPS20P20-201ENST00000460498 340 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 RPL12P40-201ENST00000467028 488 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 RN7SL272P-201ENST00000487762 289 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 AC139783.2-201ENST00000504847 1145 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 SEPT14P4-201ENST00000513445 186 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 RNU6-201P-201ENST00000517100 61 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 FO082796.1-201ENST00000523795 183 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 GZMB-205ENST00000526004 819 ntTSL 3 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 BRD9P1-201ENST00000529855 560 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 HIF1AP1-201ENST00000553642 175 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 OR4N1P-201ENST00000554847 949 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 AC136944.5-201ENST00000573021 151 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 MIR3689F-201ENST00000579617 66 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 MIR4682-201ENST00000580643 80 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 AC011468.4-201ENST00000603942 409 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 AL136097.3-201ENST00000611097 505 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 AC135050.6-202ENST00000613584 392 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 AL732618.1-201ENST00000623251 301 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 SAMMSON-227ENST00000642114 1199 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 EEF1A1P3-201ENST00000417549 1385 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 AC126773.4-201ENST00000612545 3043 ntBASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
DEPDC4Q8N2C3 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 CCT4P2-201ENST00000233836 1548 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AC068512.1-201ENST00000584542 1811 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 RNU1-21P-201ENST00000363327 163 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 Y_RNA.162-201ENST00000363683 102 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 RNU6-289P-201ENST00000364093 107 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 RNU1-39P-201ENST00000383897 165 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 SNORA10B-201ENST00000384458 133 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 U3.23-201ENST00000391132 200 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 Z97832.1-201ENST00000402490 328 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 RPL7P25-201ENST00000404151 721 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 RPSAP72-201ENST00000407020 358 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AP000534.2-201ENST00000412729 568 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AC244452.1-201ENST00000413798 141 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AL353193.1-201ENST00000421444 268 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 RIMKLBP2-201ENST00000424737 654 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AC010881.1-201ENST00000433830 235 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 OR52B5P-201ENST00000435337 951 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 OR3B1P-201ENST00000437536 893 ntBASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms