Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AL590763.1-201ENST00000398297 1545 ntBASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 SNORA77-201ENST00000408716 125 ntBASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 AC005033.1-201ENST00000428904 813 ntBASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 AL450263.2-201ENST00000439400 589 ntBASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 AC010350.1-201ENST00000504908 231 ntBASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 TAS2R6P-201ENST00000605022 826 ntBASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 NXF4-202ENST00000416098 1465 ntBASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 SNORA66-201ENST00000384792 133 ntBASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 RN7SKP229-201ENST00000410465 302 ntBASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 RANP7-201ENST00000418085 644 ntBASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 RPL35AP21-201ENST00000437667 333 ntBASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 NPM1P33-201ENST00000438918 872 ntBASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 RPS29P9-201ENST00000440360 171 ntBASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 AC093166.2-201ENST00000455969 1017 ntBASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 HMGN2P25-201ENST00000486956 268 ntBASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 AC073073.1-201ENST00000493920 463 ntBASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 RPS27AP18-201ENST00000515536 459 ntBASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 AC090022.1-201ENST00000546569 311 ntBASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 NMNAT1P1-201ENST00000554095 876 ntBASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 AC233702.9-201ENST00000581528 203 ntBASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 AC011840.5-201ENST00000582125 771 ntBASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC65Q8IXS2 AC011447.7-201ENST00000624228 1590 ntBASIC5.59□□□□□ -1.52
CCDC65Q8IXS2 THAP12P4-201ENST00000528321 2266 ntBASIC5.58□□□□□ -1.52
CCDC65Q8IXS2 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC65Q8IXS2 SNURFL-201ENST00000309296 343 ntBASIC5.58□□□□□ -1.52
CCDC65Q8IXS2 RPL23P2-201ENST00000320371 421 ntBASIC5.58□□□□□ -1.52
CCDC65Q8IXS2 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CCDC65Q8IXS2 ATP5HP3-201ENST00000396994 486 ntBASIC5.58□□□□□ -1.52
CCDC65Q8IXS2 AL450023.3-201ENST00000440592 271 ntBASIC5.58□□□□□ -1.52
CCDC65Q8IXS2 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC65Q8IXS2 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC65Q8IXS2 HMGB1P4-201ENST00000455362 567 ntBASIC5.58□□□□□ -1.52
CCDC65Q8IXS2 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC65Q8IXS2 RNA5SP92-201ENST00000516437 110 ntBASIC5.58□□□□□ -1.52
CCDC65Q8IXS2 RNA5SP34-201ENST00000516887 130 ntBASIC5.58□□□□□ -1.52
CCDC65Q8IXS2 AC012339.2-201ENST00000523996 453 ntBASIC5.58□□□□□ -1.52
CCDC65Q8IXS2 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC65Q8IXS2 AC008126.1-201ENST00000549019 480 ntBASIC5.58□□□□□ -1.52
CCDC65Q8IXS2 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC65Q8IXS2 AC116553.2-201ENST00000564203 463 ntBASIC5.58□□□□□ -1.52
CCDC65Q8IXS2 MIR3936-201ENST00000584304 110 ntBASIC5.58□□□□□ -1.52
CCDC65Q8IXS2 AC105254.2-201ENST00000603636 436 ntBASIC5.58□□□□□ -1.52
CCDC65Q8IXS2 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC65Q8IXS2 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CCDC65Q8IXS2 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.58□□□□□ -1.52
CCDC65Q8IXS2 AC000123.3-201ENST00000624029 4975 ntBASIC5.58□□□□□ -1.52
CCDC65Q8IXS2 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms