Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 OR51H2P-202ENST00000641424 3046 ntBASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 AC235565.1-201ENST00000456962 1325 ntBASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 SNORA2.3-201ENST00000383920 135 ntBASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 EI24P4-201ENST00000423683 1078 ntBASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 AC093655.2-201ENST00000425735 631 ntBASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 AL139148.1-201ENST00000427122 680 ntBASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 AC004980.3-201ENST00000447046 365 ntBASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 RN7SL443P-201ENST00000464331 290 ntBASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 RPS4XP1-201ENST00000482189 787 ntBASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 AC011270.1-201ENST00000558606 583 ntBASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 NDUFB4P11-201ENST00000560510 395 ntBASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 AC079395.2-201ENST00000610982 737 ntBASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 OR8G7P-201ENST00000616658 848 ntBASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 KARSP1-201ENST00000451871 1752 ntBASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CCDC50Q8IVM0 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 RN7SKP113-201ENST00000363891 295 ntBASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 RPS4XP16-201ENST00000427198 791 ntBASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 RPL7L1P9-201ENST00000431298 745 ntBASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 AC090686.1-201ENST00000481577 749 ntBASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 AC087283.1-201ENST00000604029 1074 ntBASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC50Q8IVM0 OR51C1P-202ENST00000641159 1444 ntBASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 CDC27P2-201ENST00000425026 1922 ntBASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 AL589994.1-201ENST00000404962 340 ntBASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 RPS6P2-201ENST00000454208 705 ntBASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 SIAH1P1-201ENST00000479411 923 ntBASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 RNA5SP360-201ENST00000516555 118 ntBASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 AC010547.7-201ENST00000570323 333 ntBASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms