Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
SNAPC4Q5SXM2 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
SNAPC4Q5SXM2 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
SNAPC4Q5SXM2 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.13
SNAPC4Q5SXM2 ATP5F1P2-201ENST00000398143 760 ntBASIC7.96□□□□□ -1.13
SNAPC4Q5SXM2 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC7.96□□□□□ -1.13
SNAPC4Q5SXM2 RPS12P10-201ENST00000427031 377 ntBASIC7.96□□□□□ -1.13
SNAPC4Q5SXM2 AC009238.2-201ENST00000431026 355 ntBASIC7.96□□□□□ -1.13
SNAPC4Q5SXM2 SCAND3P1-201ENST00000439854 1060 ntBASIC7.96□□□□□ -1.13
SNAPC4Q5SXM2 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC7.96□□□□□ -1.13
SNAPC4Q5SXM2 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC7.96□□□□□ -1.13
SNAPC4Q5SXM2 AC106806.2-201ENST00000509365 500 ntBASIC7.96□□□□□ -1.13
SNAPC4Q5SXM2 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC7.96□□□□□ -1.13
SNAPC4Q5SXM2 MIR4420-201ENST00000583944 77 ntBASIC7.96□□□□□ -1.13
SNAPC4Q5SXM2 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC7.96□□□□□ -1.13
SNAPC4Q5SXM2 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC7.96□□□□□ -1.13
SNAPC4Q5SXM2 AC067931.1-201ENST00000624190 671 ntBASIC7.96□□□□□ -1.13
SNAPC4Q5SXM2 AL049536.1-201ENST00000625043 744 ntBASIC7.96□□□□□ -1.13
SNAPC4Q5SXM2 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SNAPC4Q5SXM2 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC7.96□□□□□ -1.14
SNAPC4Q5SXM2 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SNAPC4Q5SXM2 AC073365.1-203ENST00000641055 1992 ntBASIC7.96□□□□□ -1.14
SNAPC4Q5SXM2 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SNAPC4Q5SXM2 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SNAPC4Q5SXM2 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC7.96□□□□□ -1.14
SNAPC4Q5SXM2 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
SNAPC4Q5SXM2 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.95□□□□□ -1.14
SNAPC4Q5SXM2 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SNAPC4Q5SXM2 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC7.95□□□□□ -1.14
SNAPC4Q5SXM2 RNU6ATAC5P-201ENST00000388104 126 ntBASIC7.95□□□□□ -1.14
SNAPC4Q5SXM2 RPL34P6-201ENST00000432390 345 ntBASIC7.95□□□□□ -1.14
SNAPC4Q5SXM2 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC7.95□□□□□ -1.14
SNAPC4Q5SXM2 RNU6ATAC28P-201ENST00000459249 118 ntBASIC7.95□□□□□ -1.14
SNAPC4Q5SXM2 AP002812.1-201ENST00000495378 474 ntBASIC7.95□□□□□ -1.14
SNAPC4Q5SXM2 AC015795.1-201ENST00000513669 327 ntBASIC7.95□□□□□ -1.14
SNAPC4Q5SXM2 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC7.95□□□□□ -1.14
SNAPC4Q5SXM2 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC7.95□□□□□ -1.14
SNAPC4Q5SXM2 MIR7853-201ENST00000584820 132 ntBASIC7.95□□□□□ -1.14
SNAPC4Q5SXM2 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC7.95□□□□□ -1.14
SNAPC4Q5SXM2 AC006133.1-201ENST00000617106 264 ntBASIC7.95□□□□□ -1.14
SNAPC4Q5SXM2 AC112200.1-201ENST00000625015 234 ntBASIC7.95□□□□□ -1.14
SNAPC4Q5SXM2 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC7.95□□□□□ -1.14
SNAPC4Q5SXM2 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SNAPC4Q5SXM2 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SNAPC4Q5SXM2 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SNAPC4Q5SXM2 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
SNAPC4Q5SXM2 AC093671.1-201ENST00000624981 2929 ntBASIC7.95□□□□□ -1.14
SNAPC4Q5SXM2 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
SNAPC4Q5SXM2 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 AC114755.5-201ENST00000447760 831 ntBASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 RNA5SP143-201ENST00000516936 115 ntBASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 AC053481.3-201ENST00000577881 843 ntBASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 AC069061.3-201ENST00000582254 823 ntBASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 AC093388.1-201ENST00000609166 430 ntBASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 SNX18P1Y-201ENST00000616231 511 ntBASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 AP000843.1-201ENST00000624880 701 ntBASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 RNA5SP196-201ENST00000625967 102 ntBASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 AC004076.2-201ENST00000620532 3323 ntBASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 CYP1D1P-201ENST00000416662 1433 ntBASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 RNA5SP317-201ENST00000410176 116 ntBASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 RNA5SP311-201ENST00000411290 116 ntBASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 AL450023.3-201ENST00000440592 271 ntBASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 RNA5SP315-201ENST00000516340 116 ntBASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 RNA5SP312-201ENST00000517068 116 ntBASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 AL591034.3-201ENST00000605511 685 ntBASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 AC090948.1-201ENST00000607464 549 ntBASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC7.94□□□□□ -1.14
SNAPC4Q5SXM2 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
SNAPC4Q5SXM2 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC7.93□□□□□ -1.14
SNAPC4Q5SXM2 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC7.93□□□□□ -1.14
SNAPC4Q5SXM2 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SNAPC4Q5SXM2 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SNAPC4Q5SXM2 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SNAPC4Q5SXM2 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
SNAPC4Q5SXM2 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SNAPC4Q5SXM2 OFD1P9Y-201ENST00000417699 1491 ntBASIC7.93□□□□□ -1.14
SNAPC4Q5SXM2 SALL4P2-201ENST00000423288 2910 ntBASIC7.93□□□□□ -1.14
SNAPC4Q5SXM2 AC125257.1-201ENST00000560400 2930 ntBASIC7.93□□□□□ -1.14
SNAPC4Q5SXM2 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms